Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L14
         (659 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.64 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.5  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   3.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.0  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              21   7.9  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
 Frame = +3

Query: 405 HCTAVDLLTAHNNIVTTRNKPSILIFSKRIFTIK-D*LPVVSTSL 536
           HC   +      N+ TT N P+  + S    T+    LP  STS+
Sbjct: 822 HCVTTEQSVVVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSI 866


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 341 SFTGNTDCEL*DRHTTACRSGLLLQKDHTDDFPLLSGFR 225
           SFT +      ++  T   +GLLL++   DD P L   R
Sbjct: 453 SFTVDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIR 491


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 341 SFTGNTDCEL*DRHTTACRSGLLLQKDHTDDFPLLSGFR 225
           SFT +      ++  T   +GLLL++   DD P L   R
Sbjct: 453 SFTVDKLITYFEQFDTTINNGLLLEEQRNDDKPFLIKIR 491


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 190 DEPIRNLASHVLRNPDRSGKSS 255
           D+ + +LA+H +    RSGK S
Sbjct: 354 DDLLNDLAAHKMHGRGRSGKKS 375


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 508 SFIVNIRFEKMRMDGLFL 455
           +F  N+R E +R+DG FL
Sbjct: 521 AFERNMRLEAIRLDGNFL 538


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 331 VIPIVNCETAIPQPVAQDF 275
           V+PI   ET+I Q    DF
Sbjct: 29  VVPICRIETSIDQQKEDDF 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,956
Number of Sequences: 438
Number of extensions: 3473
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)