Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_L09
(619 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 294 8e-81
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 68 9e-13
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 68 9e-13
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 64 2e-11
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 56 5e-09
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 55 9e-09
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 53 4e-08
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 52 9e-08
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 45 1e-05
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 31 0.13
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 28 0.94
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 27 2.2
SPAC343.01c |erg8||phosphomevalonate kinase |Schizosaccharomyces... 26 3.8
SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomy... 26 3.8
SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual 26 5.0
SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces pomb... 25 8.8
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 294 bits (721), Expect = 8e-81
Identities = 136/206 (66%), Positives = 175/206 (84%)
Frame = +1
Query: 1 RFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKG 180
R YAKD++FG D RA +L GVD LA AV+VT+GPKGRNV+++Q +GSPKITKDGVTVA+
Sbjct: 31 RTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARS 90
Query: 181 VELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRG 360
V LKDKF+N+GA+LVQ+VA+ TNE AGDGTTTATVL RAI E ++ G NP+++RRG
Sbjct: 91 VSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRG 150
Query: 361 VMLAVDNVKDKLKSMSKPVTTPEEIAQVATISANGDTAIGQLIADAMKKVGRDGVITVKD 540
+ LAVDNV + L++ + +TT EEI+QVATISANGDT IG+L+A AM++VG++GVITVK+
Sbjct: 151 IQLAVDNVVEFLQANKRDITTSEEISQVATISANGDTHIGELLAKAMERVGKEGVITVKE 210
Query: 541 GKTLNDDLEIIEGMKFDRGYISPYFI 618
G+T++D+LE+ EGMKFDRGYISPYFI
Sbjct: 211 GRTISDELEVTEGMKFDRGYISPYFI 236
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 68.1 bits (159), Expect = 9e-13
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
Frame = +1
Query: 28 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 207
G D + +A+ V ++GP+G + IL G +T DG T+ +E++ +
Sbjct: 32 GIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQI-- 89
Query: 208 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDNVK 387
AKL+ ++ + ++E GDGTT VLA A+ ++ I KG +PI I G A
Sbjct: 90 --AKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAV 147
Query: 388 DKLKSMSKPVTTPEEIAQVATISANGDTAIGQLIA----DAMKKVGRDGVITVKDGKTLN 555
L ++S V E + + T++G + D + D V++V D + +
Sbjct: 148 KHLDAISDVVDFSPE--NTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKD 205
Query: 556 DDLEIIE 576
D E+I+
Sbjct: 206 VDFELIK 212
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 68.1 bits (159), Expect = 9e-13
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 8/205 (3%)
Frame = +1
Query: 28 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQ-SWGSPKITKDGVTVAKGVELKDKFQ 204
G + R G + D V T+GPKG + IL+ S G +T DG T+ K + L
Sbjct: 18 GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIAL----D 73
Query: 205 NIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDNV 384
N AK++ N++ ++E GDGTT+ V A + ++ ++ +P I G +A
Sbjct: 74 NAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTA 133
Query: 385 KDKLKSMSKPVTTPEEIAQVATISAN-GDTAIGQLIADAMK----KVGRDGVITVKDGKT 549
D L++ S + + A+ + N T + I K ++ D V+ +K G T
Sbjct: 134 IDALRASS--IDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLK-GST 190
Query: 550 LNDDLEIIE--GMKFDRGYISPYFI 618
D+++II+ G K D ++ FI
Sbjct: 191 NLDNIQIIKILGGKLDDSFLDEGFI 215
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 63.7 bits (148), Expect = 2e-11
Identities = 48/187 (25%), Positives = 92/187 (49%), Gaps = 3/187 (1%)
Frame = +1
Query: 34 DVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIG 213
+VR + +ADA+ ++GPKG + +++ G +T DG T+ K + +
Sbjct: 19 EVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHP----A 74
Query: 214 AKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDNVKDK 393
AK++ +++ + EAGDGTT+ +LA ++ + + KG +P I A D
Sbjct: 75 AKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDC 134
Query: 394 LK--SMSKPVTTPEEIAQVATISANGDTAIGQLIADAMKKVGRDGVITVKDGK-TLNDDL 564
+K +++ ++ E + + AT S N + I ++ + + D V+ V D + N DL
Sbjct: 135 MKENALAIELSDRESLLRAATTSLN--SKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDL 192
Query: 565 EIIEGMK 585
+ I +K
Sbjct: 193 KDIRIVK 199
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 55.6 bits (128), Expect = 5e-09
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Frame = +1
Query: 28 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 207
G DVR + +A+ V ++GP G + +L G +T DG T+ + L D
Sbjct: 19 GEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATI---LSLLDVEHP 75
Query: 208 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV-DNV 384
G LV+ +A ++E GDGTT+ ++A + + E + +P I G LA+ + V
Sbjct: 76 AGKVLVE-LAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAV 134
Query: 385 KDKLKSMSKPVTT--PEEIAQVATISANGDTAIGQLIADAMKKVGRDGVITVK 537
K +S V + E + VA S + IG +D + D +++VK
Sbjct: 135 KFMTDVLSCSVDSLGKESLINVAKTSMS-SKIIGN-DSDFFSTMAVDAMLSVK 185
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 54.8 bits (126), Expect = 9e-09
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 1/173 (0%)
Frame = +1
Query: 70 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 249
L D + +GP G +L G+ K+TKDG + +++ QN A + A +
Sbjct: 28 LQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQI----QNPTASCIAKAATAQD 83
Query: 250 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDNVKDKLKSMSKPVTTPE 429
+ GDGTT+ +L + K+ I +G +P I G LA + L S
Sbjct: 84 DATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDR 143
Query: 430 EI-AQVATISANGDTAIGQLIADAMKKVGRDGVITVKDGKTLNDDLEIIEGMK 585
E+ VA S + T I + +++ D ++T++ DL ++E MK
Sbjct: 144 EVLLNVAKTSLS--TKISSKVVESLAPAVVDAILTIRRPDE-PIDLHMVEIMK 193
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 52.8 bits (121), Expect = 4e-08
Identities = 41/173 (23%), Positives = 73/173 (42%)
Frame = +1
Query: 52 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 231
+Q +AD + +GP+ +L GS +T DG + + +E+ AK +
Sbjct: 25 IQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP----AAKSMIE 80
Query: 232 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDNVKDKLKSMSK 411
+A +EE GDGTT+ +LA I + + +P+ + R A+++ + ++
Sbjct: 81 LARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITL 140
Query: 412 PVTTPEEIAQVATISANGDTAIGQLIADAMKKVGRDGVITVKDGKTLNDDLEI 570
PV + I T + +D M + V TV T N +EI
Sbjct: 141 PVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTV--ASTSNGRMEI 191
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 51.6 bits (118), Expect = 9e-08
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Frame = +1
Query: 76 DAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEE 255
D + T+GP G + ++ G I+ DG T+ K +++ AK + ++A + E
Sbjct: 38 DTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHP----AAKTLVDIARAQDAE 93
Query: 256 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDNVKDKLKSMSKPVTTPEEI 435
GDGTT+ V A + +E + G + I RG A +K+K ++ + +E
Sbjct: 94 VGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEG 153
Query: 436 AQVATISANGDTAIGQLI----ADAMKKVGRDGVITVKDGKTLNDDL 564
++ TA+ + + K+ D V+T+ D + LN+++
Sbjct: 154 KLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTL-DQEDLNENM 199
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 44.8 bits (101), Expect = 1e-05
Identities = 26/112 (23%), Positives = 48/112 (42%)
Frame = +1
Query: 70 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 249
L++ ++GP G+N I+ +T D T+ + +E+ AKLV +
Sbjct: 38 LSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHP----AAKLVVDATQQQE 93
Query: 250 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDNVKDKLKSM 405
E GD V + + I G P+EI +G +A+ + + L+ +
Sbjct: 94 NELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEI 145
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2244
Score = 31.1 bits (67), Expect = 0.13
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +1
Query: 109 RNVILEQSWGSPKITKDGVTVAK-GVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATV 285
R VI ++ S +T G T G+ELKD+F+ +G K++ T + T +
Sbjct: 542 RKVIKQERPDSIYVTFGGQTALNVGIELKDEFEQLGVKVL-----GTPIDTIITTEDREL 596
Query: 286 LARAIAKEGFEKISKGANPIEIRRGVMLAVD 378
ARA+ E EK +K A+ I + ++ D
Sbjct: 597 FARAM-DEINEKCAKSASASSIEEAIKVSKD 626
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 28.3 bits (60), Expect = 0.94
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = -3
Query: 224 TNLAPMFWNLSFSSTPLATVTPSFVILGE-PQDCSRITFLPF-GPIVTATASARMSTPCS 51
T++AP + S+T + + +PS I+G D S + L + PI + T S+ +
Sbjct: 145 TSIAPTYSASDSSATTITSSSPSTSIIGTGSTDTSVSSTLTYHTPIASPTTSSNSDNEYT 204
Query: 50 IRALTSAPNLTSF 12
+ +TS+ +L+SF
Sbjct: 205 VDVITSS-SLSSF 216
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 2.2
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Frame = +1
Query: 373 VDNVKDKLKSMSKPVTTPEEIAQVATI---------SANGDTAIGQLIADAMKKVGRDGV 525
VD + L S SKP+ P+ +A+ T+ ANG + I K+V
Sbjct: 25 VDPTLNLLFSQSKPI--PKPVAKETTVLTKKDVEVEEANGVEEAAETIESDTKEVQNIKP 82
Query: 526 ITVKDGKTLNDDLEIIEGMKFD 591
+ K K LND + IEG F+
Sbjct: 83 KSKKKKKKLNDSSDDIEGKYFE 104
>SPAC343.01c |erg8||phosphomevalonate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 3.8
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -3
Query: 485 SCPIAVSPLAEIVATCAISSGVVTGFDMXXXXXXXXXTASITPRLISMGFAPF-EIFSNP 309
S + V LA+I A C+ V +GFD+ P+LI P+ E N
Sbjct: 191 STKVIVHNLAQI-AHCSAQGKVGSGFDVGAATWGSCIYRRFDPKLIEQLLVPYDEQIKNI 249
Query: 308 SLAIALARTXXXXXXXXXXSFVLFATFC 225
+ + L R F L AT+C
Sbjct: 250 NFSTEL-RKIVSKKWSDVVPFQLPATYC 276
>SPBC16G5.18 |erg24||C-14 sterol reductase Erg24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 424
Score = 26.2 bits (55), Expect = 3.8
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -2
Query: 261 SCLLVRIICNVLY*FGTDVLEFVF 190
+CL++ ++C +Y G +EF++
Sbjct: 110 ACLILGVVCTSIYLLGASCMEFIW 133
>SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 25.8 bits (54), Expect = 5.0
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +1
Query: 229 NVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVM----LAVDNVKDKL 396
N +NT + GD T+ TV+ ++K N +E +R M A+ N ++L
Sbjct: 236 NPTSNTKQSVGDNTSPQTVIDTEGLNAIKADLAKLFNLVESQRQKMDSLHFALTNALERL 295
Query: 397 KSMSKPVTTPEE 432
+S P E
Sbjct: 296 NDISSTSQFPSE 307
>SPBC776.03 |||homoserine dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 25.0 bits (52), Expect = 8.8
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 205 NIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDN 381
NIG +L+ + + +GTT+ V+A + + EG +SK PI + L N
Sbjct: 17 NIGGELLNQIKGFNENASTNGTTSFNVVAIS-SMEG-HYVSKDYQPINLSEWKNLTSQN 73
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,367,143
Number of Sequences: 5004
Number of extensions: 45415
Number of successful extensions: 115
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -