Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L06
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    29   0.035
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    29   0.035
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.0  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   4.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.0  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   9.2  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 269 LRVRPNYELSRLGSCWTYEAPSTDSS 192
           L+ RP++ELS+ G  WT+ + S D++
Sbjct: 31  LQPRPSFELSKNGDEWTFTSSSGDNT 56


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 0.035
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -1

Query: 269 LRVRPNYELSRLGSCWTYEAPSTDSS 192
           L+ RP++ELS+ G  WT+ + S D++
Sbjct: 33  LQPRPSFELSKNGDEWTFTSSSGDNT 58


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +1

Query: 133 LHNAIGILYVAFLGDSVHSSDESVDGA---SYVQHEPNLDSS*LG 258
           LH+ +G LY      S   ++   DGA    Y    P L+   +G
Sbjct: 104 LHDHLGTLYPGMRAPSFRCTERPEDGALILHYYSDRPGLEHIVIG 148


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +1

Query: 133 LHNAIGILYVAFLGDSVHSSDESVDGA---SYVQHEPNLDSS*LG 258
           LH+ +G LY      S   ++   DGA    Y    P L+   +G
Sbjct: 104 LHDHLGTLYPGMRAPSFRCTERPEDGALILHYYSDRPGLEHIVIG 148


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +2

Query: 131 TCIMLSAFCMWLFWVTVYIAQMNPLMGLRMSNTSLIWI 244
           TC   S F +    +  YIA   P+   +  N   +W+
Sbjct: 268 TCSTSSIFNLVAISIDRYIAVTQPIKYAKHKNNRRVWL 305


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 94  SCT*RREQRSHKN 132
           SC+  REQ+S+KN
Sbjct: 273 SCSREREQKSYKN 285


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 232 PNLDSS*LGRTRKLRIEKYEMKYNM 306
           PNL    L R +   +E+Y  + NM
Sbjct: 502 PNLQILNLARNKVQHVERYAFERNM 526


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 265 GFAPIMSYPD*ARVGHTKPHQRIHLS 188
           G +  +  P    +GH + H  IHLS
Sbjct: 178 GISNEVELPQFRVLGHRQRHSTIHLS 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,537
Number of Sequences: 438
Number of extensions: 3209
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)