Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L04
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   175   2e-44
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   124   4e-29
Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p4...    29   3.3  
Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    28   4.3  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  175 bits (426), Expect = 2e-44
 Identities = 94/197 (47%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
 Frame = +3

Query: 3   KTAQGLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPAASL-PHVLRWYSHIASYTPA 179
           K+  GL   N  LAE+++ +G+  S  D ++F  +G  P AS  P+V RWY+++ASYT A
Sbjct: 6   KSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDA 65

Query: 180 ERKTWSEGVSXXXXXXXXXXXXXXSNXXXXXXXXLFGSGXXXXXXXXXXXXXXXLKAYAD 359
           ERKTW+                            LFGS                L AYA+
Sbjct: 66  ERKTWASAGGSAPAAAAADGDDFD----------LFGSDDEEEDAEKAKIVEERLAAYAE 115

Query: 360 KKSKKPALIAKSSIILDVKPWDDETDMKEMENQVRTIEMDGLLWGASKLVPVGYGINKLQ 539
           KK+KK   IAKSS+ILDVKPWDDETD+ EME  VR+IEMDGL+WG +KL+P+GYGI KLQ
Sbjct: 116 KKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQ 175

Query: 540 IMCVIEDDKVSVDLLTE 590
           I+ VIED KVSVD L E
Sbjct: 176 IITVIEDLKVSVDDLIE 192


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  124 bits (300), Expect = 4e-29
 Identities = 63/103 (61%), Positives = 72/103 (69%)
 Frame = +3

Query: 282 LFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSIILDVKPWDDETDMKEMENQV 461
           LFGS                L AYA KK+ K   IAKSS+ILDVKPWDDETD+ EME  V
Sbjct: 140 LFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKLV 199

Query: 462 RTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTE 590
           R+IEMDGL+WG +KL+P+GYGI KLQI+ VIED KVSVD L E
Sbjct: 200 RSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIE 242


>Z66495-5|CAA91272.1|  501|Caenorhabditis elegans Hypothetical
           protein C36A4.6 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 122
           G+N+LNQ L + +Y +G+  +++ I      GK+ A
Sbjct: 117 GMNQLNQSLLQNTYATGWKHTRSAIAPIFSTGKMKA 152


>AF038613-2|AAB92049.1|  477|Caenorhabditis elegans Cytochrome p450
           family protein 25A5 protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 15  GLNELNQYLAERSYVSGYTPSQADIKVFEQVGKVPA 122
           G+N+LNQ L + +Y +G+  +++ +      GK+ A
Sbjct: 93  GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128


>Z34799-1|CAA84315.1|  147|Caenorhabditis elegans Hypothetical
           protein F34D10.3 protein.
          Length = 147

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -2

Query: 392 LCNKSGFLRLFVSICLKTFFTDSGCFCILF 303
           L N SG  + ++ +CL  F TD+ CF +LF
Sbjct: 27  LDNSSGD-KQYIFLCLIVFATDAACFGVLF 55


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +3

Query: 396 SIILDVKPWDDETDMKEMENQVRTIEMDGLLWGASKLVPVGY 521
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSY 471


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,903,054
Number of Sequences: 27780
Number of extensions: 223912
Number of successful extensions: 687
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)