Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_L02
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83216-12|CAB05675.2|  323|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical pr...    27   7.6  
U23172-17|ABC48254.1|  923|Caenorhabditis elegans Hypothetical p...    27   7.6  

>Z83216-12|CAB05675.2|  323|Caenorhabditis elegans Hypothetical
           protein C08F11.4 protein.
          Length = 323

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +1

Query: 82  ITHYSCNTTASVAQLYYIRLPF*GLGFDPRVGSSDIGFFLLSIIPEFGICARYGDKLAPC 261
           ++H+ C     +A  +YIRLP  GL       S   G+ ++ II  F +   Y   L PC
Sbjct: 71  LSHFMC-LLFFIADFFYIRLPVTGLFTSWCASSEPNGYLVILIIITFYL--NYATMLFPC 127


>Z81568-3|CAB04592.1|  643|Caenorhabditis elegans Hypothetical
           protein K08E3.4 protein.
          Length = 643

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 293 ISPSLVPSQM*QGASLSPYRAQIPNSGMILSRKNPISLDPTRGSNPRPQ-NGS 138
           IS   VPS +    + +P  A  P++G++ SRK   S  P+    P+PQ NGS
Sbjct: 358 ISDKPVPSSV----NPAPAPAPTPSAGLVGSRKELFSSKPSGPVLPKPQVNGS 406


>Z70686-9|CAA94614.3|  915|Caenorhabditis elegans Hypothetical
           protein R10H10.7 protein.
          Length = 915

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 200 YSVSSRSLEFVLDMATSSPPVTSGTELSSAKCGWCSSLLHLCLTLR 337
           Y  S  +   V+ +   S P+T GTEL  + C    SL+++ L ++
Sbjct: 524 YLTSETNKSCVIKLKDDSKPLTHGTELDWSTCIESLSLVNVTLCMK 569


>U23172-17|ABC48254.1|  923|Caenorhabditis elegans Hypothetical
           protein F25B5.1b protein.
          Length = 923

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +1

Query: 508 MKNAFKVYVYDNNNIF*YSFYVN 576
           MK+A  VYV D NN+F   FY N
Sbjct: 475 MKSAEGVYVADQNNVFPTYFYRN 497


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,925,318
Number of Sequences: 27780
Number of extensions: 276102
Number of successful extensions: 607
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)