Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_K16
         (413 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    28   0.048
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   4.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   5.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   7.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    20   9.6  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 27.9 bits (59), Expect = 0.048
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +3

Query: 75  DLVCGTNYCKDHPCTAPIAPRSCRSPSLYRANHSGKCACCP--ACVTLLSENAGCKTYSK 248
           +++C T+  +     +    RS +    Y A+    C CC   AC   ++  AGCK Y+ 
Sbjct: 711 NVMCRTSGPRGVAIVSASTARSEQFLCRYEAHCFALCHCCDFDACDCEMTCPAGCKCYND 770

Query: 249 GNW 257
             W
Sbjct: 771 RTW 773


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 134 KELPFSLVIQSQSLRQVRLLPSL 202
           + L   LVI+ QS  Q RLL S+
Sbjct: 218 QSLEVQLVIEEQSTEQERLLLSV 240


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 138 SCRSPSLYRANHSGKCACCPACV 206
           +C S    RA     CACCP  V
Sbjct: 391 ACWSRDFRRAFVRILCACCPGRV 413


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 4/9 (44%), Positives = 7/9 (77%)
 Frame = -2

Query: 340 PLNVWVSPW 314
           P++ W+ PW
Sbjct: 538 PIHTWIHPW 546


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/30 (20%), Positives = 15/30 (50%)
 Frame = +1

Query: 79  WYAVQTIVKIIPALRRSPQGVAVLPRYTEP 168
           W++ +  + +   L++      +L +YT P
Sbjct: 156 WHSPEAHISVAQKLQKEIPNSIILDQYTNP 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,558
Number of Sequences: 438
Number of extensions: 2501
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)