Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_K15
(676 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.009
SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyce... 34 0.022
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.20
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.61
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 2.5
SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.5
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.5
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 26 4.3
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 26 4.3
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 4.3
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 26 5.7
SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|c... 26 5.7
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 5.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 7.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 7.6
SPAC13F5.03c |||glycerol dehydrogenase |Schizosaccharomyces pomb... 25 7.6
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 25 10.0
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 10.0
SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate syntha... 25 10.0
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 10.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.009
Identities = 34/103 (33%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Frame = +1
Query: 118 PTTPSGGKAGGFIATPPQ-YGGPSQPPDGFSTPPGVDSKNLSNSFLQEEMSNLPPAYDSI 294
P P A G I PPQ P PP + G LS+S PPA
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG- 397
Query: 295 HHNMPAHVPTPQ-PRSRVPPTNHFPELPELPSVPSDLILPSVP 420
+ PA P R+ PP P LP PS P L PS P
Sbjct: 398 -RSAPALPPLGNASRTSTPPVPTPPSLP--PSAPPSL-PPSAP 436
>SPBC32H8.02c |nep2|mug120|nedd8 protease Nep2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 415
Score = 33.9 bits (74), Expect = 0.022
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Frame = +1
Query: 172 YGGPSQPPDGFSTPPGVDSKNLSNSFLQEEMSNLPP----AYDSIH-HNMPAHVPTPQPR 336
YG P T P D K S EE+ LP DS H++PA +P+ QP+
Sbjct: 282 YGSKVPKPSETHTDPEKDKKIFSKICKTEELLELPTLSAVTSDSAQPHSLPASMPSSQPQ 341
Query: 337 SR---VPPTNHFPE-LPELPSVPS 396
SR +P T+ E P+L S P+
Sbjct: 342 SRSESLPLTHPNSEPNPKLDSQPN 365
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.20
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Frame = +1
Query: 115 YPTTPSGGKAGGFIATPPQYGGPSQPPDGFST-PPGVDS---KNLSNSFLQEEMSNLPPA 282
+ P KA G + P PP S PP V + ++ S Q+ S++ PA
Sbjct: 1453 HAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPA 1512
Query: 283 YDSIHHNMPAHVPTPQPRSRVPPTNHFPELPELPSVPSDLILP 411
P+ S PP P L S P+D +P
Sbjct: 1513 TAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALSSAPADNSMP 1555
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 157 ATPPQYGGPSQPPDGFSTPP 216
A PPQ P+ PP S PP
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPP 1716
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +1
Query: 307 PAHVPTPQPRSRVPPTNHFPELPELP-SVPSDLILPSVP 420
P P +P+S PP P P P SVP P +P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 25.0 bits (52), Expect = 10.0
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 304 MPAHVPTPQPRSRVPPTNHFPELPELPSVPSDLILPSVP 420
M A P P P S PP P P +P+ P P +P
Sbjct: 1702 MSAPTPPPPPMSVPPP----PSAPPMPAGPPSAPPPPLP 1736
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.61
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 1/107 (0%)
Frame = +1
Query: 103 QAFSYPTTPSGGKAGGFIATPPQYGGPSQPP-DGFSTPPGVDSKNLSNSFLQEEMSNLPP 279
+A S P P+ ++ P P P PP + S Q ++ + P
Sbjct: 555 EAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAP 614
Query: 280 AYDSIHHNMPAHVPTPQPRSRVPPTNHFPELPELPSVPSDLILPSVP 420
S+ PA VP VP P +PE+PSVP +P VP
Sbjct: 615 EVPSVPQR-PA-VPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVP 659
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 316 VPTPQPRSRVPPTNHFPELPELPSVPSDLILPSVP 420
VP VP P +PE+PSVP +P VP
Sbjct: 655 VPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVP 689
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +1
Query: 298 HNMPAHVPTPQPRSRVPPTNHFPELPELPSVPSDLILPSVP 420
H PA P+ S P P +PE PSVP +P VP
Sbjct: 530 HQPPAAPVAPEVPS-APQRPAAPVVPEAPSVPQRPAVPVVP 569
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 316 VPTPQPRSRVPPTNHFPELPELPSVPSDLILPSVP 420
VP+ R VP P +P+ P+ P +PSVP
Sbjct: 646 VPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVP 680
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 307 PAHVPTPQPRSRVPPTNHFPELPELPSVPSDLILPSVP 420
PA P+ S VP P +PE PSVP P VP
Sbjct: 638 PAAPVVPEVPS-VPQRPAVPVVPEAPSVPQPPAAPVVP 674
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 259 EMSNLPPAYDSIHHNMPAHVPTPQPRSRVPPTNHFPELPELPSV 390
E S L + + + H H P+ + PP+NH P ++P +
Sbjct: 99 ERSELAASNNQVTHIDQEH-PSQTKSTSQPPSNHLPAFQQIPPI 141
>SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 377
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 274 PPAYDSIHHNMPAHVPTPQPRSRVPPTN 357
PPAY+ + + P +P P P PTN
Sbjct: 349 PPAYEQVARSSPTDIPLPPPSC---PTN 373
>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 462
Score = 27.1 bits (57), Expect = 2.5
Identities = 21/82 (25%), Positives = 33/82 (40%)
Frame = +1
Query: 175 GGPSQPPDGFSTPPGVDSKNLSNSFLQEEMSNLPPAYDSIHHNMPAHVPTPQPRSRVPPT 354
G S P G + PG+ ++ S + NL Y PA VP+ P+ + T
Sbjct: 146 GKTSNPSQGTTKCPGIFEEDNFFSVSPKRRKNLFEKYGKTDLGKPARVPS--PKKSLSST 203
Query: 355 NHFPELPELPSVPSDLILPSVP 420
P P +P+ ++ S P
Sbjct: 204 IKSP--PSRVKLPTSILSKSPP 223
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Frame = +1
Query: 166 PQYGGPSQPPDGFSTP----PGVDSKNLSN-SFLQEEMSNLPPAYDSIHHNMP 309
P Y PSQPP + P P + S+ S S L +E PP ++ MP
Sbjct: 100 PSYSQPSQPPKEPALPSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMP 152
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 4.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 118 PTT-PSGGKAGGFIATPPQYGGPSQPPDGFSTP--PGVD-SKNLSNSFLQEEMSNLPPAY 285
PTT A G +A P + + P S P P + S + + +F + ++SN +Y
Sbjct: 446 PTTYEETSSATGLLAYPNESHDIASEPFSISWPQNPSISGSVHSATTFDKAQLSNTEDSY 505
Query: 286 DSIHH 300
D+I H
Sbjct: 506 DNISH 510
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.2 bits (55), Expect = 4.3
Identities = 17/69 (24%), Positives = 27/69 (39%)
Frame = +1
Query: 184 SQPPDGFSTPPGVDSKNLSNSFLQEEMSNLPPAYDSIHHNMPAHVPTPQPRSRVPPTNHF 363
S+P + ++ + + NS QE D+ H+ P Q S V NH
Sbjct: 352 SKPNEAPTSSENIKADQPENSTKQENPEEDMQIKDAEEHSNLESTPAAQQTSEVEANNHQ 411
Query: 364 PELPELPSV 390
+ LP+V
Sbjct: 412 EKPSSLPAV 420
>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 4.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +1
Query: 163 PPQYGGPSQPPDGFSTPPGVDSKNLSNSFLQEEMSNLPP 279
P YG PS PP G+ S L+N + ++ L P
Sbjct: 130 PQSYGYPSYPPAGYRGGSARPSGVLANDEVYRVLAQLAP 168
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 5.7
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +1
Query: 154 IATPPQYGGPSQPPDGFSTPPGVDSKNLSN-------SFLQEEMSNLPPAYDSIHHNMPA 312
+A+ Q G S PP + PPG+ + N SN S + + ++PP N P
Sbjct: 375 LASVKQPSGFS-PPSAVAPPPGLGNHNFSNDDSSFFRSLMTSDTRSVPPP-PGFSTNAPK 432
Query: 313 HVPTPQ 330
V +P+
Sbjct: 433 AVKSPE 438
>SPAC14C4.12c |||SWIRM domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 5.7
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 319 PTPQPRSRVPPTNHFPELPELPSVPSDLILPSVP 420
P+P P +V T P+ +P P D I+ P
Sbjct: 35 PSPIPNDKVASTVDVPKCSTIPESPKDSIVEPKP 68
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.8 bits (54), Expect = 5.7
Identities = 30/104 (28%), Positives = 37/104 (35%)
Frame = +1
Query: 184 SQPPDGFSTPPGVDSKNLSNSFLQEEMSNLPPAYDSIHHNMPAHVPTPQPRSRVPPTNHF 363
S PP F PP SKN ++S L S N P PT R P+N
Sbjct: 67 SLPP--FDHPP---SKNPTSSSLSTRKRWRQKRLWSFK-NFPFRPPT---RLTSTPSNS- 116
Query: 364 PELPELPSVPSDLILPSVPHXXXXXXXXXXXXXXXGPDEIDFDD 495
LP +PS S + S+PH ID D+
Sbjct: 117 SSLPSIPSSSSTPSISSIPHTTSSVSNDIPSVLGSSDHPIDLDN 160
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 319 PTPQPRSRVPPTNHFPELPELPSVPSDLI-LPSVP 420
P P+P + VPP P E P VP + +P VP
Sbjct: 1180 PVPKPAAGVPPV---PPPSEAPPVPKPSVGVPPVP 1211
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 181 PSQPPDGFSTPPGVDSKNLSNSFLQEEMSNLPPAYDSIHHNMPAHVPTPQP 333
P+ PP PP + K N+F + N+ S+ MPA P P P
Sbjct: 905 PTPPP-----PPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPP 950
>SPAC13F5.03c |||glycerol dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +1
Query: 214 PGVDSKNLSNSFLQEEMSNLPPAYDSIHHNMPAHVPTPQPRSRVPPTNHFPELPEL 381
P N+S F ++++ A DS + R R+PP+ H P L ++
Sbjct: 394 PDESIHNMSKKFNPSQIADAIKAVDSYSQKWQEQTGWTE-RFRLPPSRHSPHLTDI 448
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.0 bits (52), Expect = 10.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 294 SS*YASTRSHPTTTFSGSTDQPLSRVTGTTISAV*FDSTLS 416
SS + ST P+TT S STD S T+ S+ +T+S
Sbjct: 145 SSQFQSTTLTPSTTDSSSTDVSSSDSVSTSASSSNASNTVS 185
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 25.0 bits (52), Expect = 10.0
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -2
Query: 345 NPRTWLWGGNVCWHIMMNAVISWW 274
NP T +W C+H+ + I W
Sbjct: 205 NPSTSIWSCGTCYHVFHLSCIRKW 228
>SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate synthase
Arg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 25.0 bits (52), Expect = 10.0
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 337 SRVPP-TNHFPELPELPSVPS 396
S+VPP TNH LP+ PS P+
Sbjct: 18 SKVPPVTNHERILPKQPSFPT 38
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 25.0 bits (52), Expect = 10.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 229 KNLSNSFLQEEMSNLPPAYDSIHHNMPAHVP-TPQPRSRVPPTNHFPEL 372
K ++ F Q SN+ ++ N ++VP TP ++ PPTN P +
Sbjct: 81 KFAASMFKQLNASNM---ITTVRSNYASNVPSTPSDSTQQPPTNTLPSV 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,803,093
Number of Sequences: 5004
Number of extensions: 61422
Number of successful extensions: 244
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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