Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_K12
         (598 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    23   3.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   5.3  

>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
          finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 87 ELCGRVLCLRGDLDPRVRE 31
          +LCG+VLC +  L   V +
Sbjct: 9  QLCGKVLCSKASLKRHVAD 27


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +1

Query: 94   SPDEFYCLTLLEETGVCVVPGTGFGQLPGTFHFRTTILHPKAEFQH 231
            S   FY  +  +   + V PGTG     G +H R   +  + + ++
Sbjct: 954  SAPNFYMPSEPKAPMILVGPGTGIAPFRGFWHHRLAEIKRRPDLEY 999


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 37  YPRVEIPAKAQHAAAQLGLSPDEFY 111
           YP   IP  A+ A   LG++  EF+
Sbjct: 42  YPENLIPRLAKKAIQVLGVTEKEFF 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,230
Number of Sequences: 438
Number of extensions: 3111
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)