Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_K11
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0039 + 447573-448911,451247-451296,451322-451423 30 0.43
02_05_0854 - 32267047-32267298,32267383-32268194,32268289-322684... 29 0.98
02_05_0853 + 32261705-32261794,32261895-32262027,32262117-322629... 29 0.98
01_03_0269 + 14442886-14442978,14443306-14443377,14443551-144440... 29 0.98
10_01_0037 + 434995-436299 28 1.3
08_02_0141 - 13112399-13112514,13112898-13112994,13113113-13113430 27 2.3
06_03_0987 - 26589277-26589420,26589620-26589774,26589845-26589890 27 2.3
05_05_0299 - 23930657-23932627 27 3.0
04_04_0144 - 23095172-23095830,23095915-23097265 27 3.0
03_06_0042 + 31247084-31247641,31248396-31248482,31248684-312487... 27 3.0
02_04_0217 + 20992238-20992397,20992488-20992792,20992910-209930... 27 3.0
11_04_0203 - 14828009-14828110,14828171-14828269,14828375-148284... 27 4.0
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 27 4.0
11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,778... 26 5.2
04_03_1016 + 21742060-21742219,21742301-21742596,21742705-217427... 26 5.2
02_05_0733 + 31309835-31310434,31314138-31314254,31314364-313148... 26 5.2
01_03_0286 - 14657682-14657803,14658194-14658419,14659894-146598... 26 5.2
10_03_0022 - 7143112-7143698,7144022-7144070,7145171-7145283,714... 26 6.9
04_04_1156 - 31319747-31320085,31320556-31320706,31320795-313210... 26 6.9
03_02_0326 + 7474352-7474448,7474913-7474977,7475105-7475191,747... 26 6.9
10_08_0913 + 21527267-21527377,21528290-21528742 25 9.2
07_03_1192 + 24698355-24698433,24699312-24699391,24700027-247004... 25 9.2
07_01_0624 + 4651995-4654715 25 9.2
04_03_0930 - 20891334-20891511,20891958-20892109,20892737-208931... 25 9.2
>10_01_0039 + 447573-448911,451247-451296,451322-451423
Length = 496
Score = 29.9 bits (64), Expect = 0.43
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 147 RLHTVQLERPAFDWRFLVCLRWRCDEVSLPEADHPR 40
RL +L R D++ L WRC +LP A H R
Sbjct: 259 RLLPARLGRRCTDFQLLAATLWRCRTAALPYAPHRR 294
>02_05_0854 -
32267047-32267298,32267383-32268194,32268289-32268421,
32268530-32268619
Length = 428
Score = 28.7 bits (61), Expect = 0.98
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 148 NAYPKPLITWKKRLSGADPNADVTDFDRR--ITAGPDGNLY 264
NA+ + L+ W R+ GA+ NA DF + + +G L+
Sbjct: 246 NAHRQELVNWVDRVGGANSNATAFDFTTKGILNVAVEGELW 286
>02_05_0853 +
32261705-32261794,32261895-32262027,32262117-32262928,
32263020-32263271
Length = 428
Score = 28.7 bits (61), Expect = 0.98
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 148 NAYPKPLITWKKRLSGADPNADVTDFDRR--ITAGPDGNLY 264
NA+ + L+ W R+ GA+ NA DF + + +G L+
Sbjct: 246 NAHRQELVNWVDRVGGANSNATTFDFTTKGILNVAVEGELW 286
>01_03_0269 +
14442886-14442978,14443306-14443377,14443551-14444045,
14444134-14444253
Length = 259
Score = 28.7 bits (61), Expect = 0.98
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 148 NAYPKPLITWKKRLSGADPNADVTDF 225
NA+ + L+ W R+ GA+ NA DF
Sbjct: 123 NAHRQELVNWVNRVGGANSNATAFDF 148
>10_01_0037 + 434995-436299
Length = 434
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 147 RLHTVQLERPAFDWRFLVCLRWRCDEVSLPEADHPR 40
RL L R D++ L WRC +LP A H R
Sbjct: 258 RLLPAPLGRRCTDFQLLPAALWRCRTAALPYAPHRR 293
>08_02_0141 - 13112399-13112514,13112898-13112994,13113113-13113430
Length = 176
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 8 ASLKPQPVLPARG*SASGRLTSSHRQRRHTRKRQSKAGLSN 130
ASL P+PVLPA +A+ +SS R R S G SN
Sbjct: 2 ASLLPRPVLPA---AAAASTSSSSRCRYRITTSSSARGWSN 39
>06_03_0987 -
26589277-26589420,26589620-26589774,26589845-26589890
Length = 114
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 72 EVSLPEADHPRAGNTGWGF 16
EV LP + PR G+ WGF
Sbjct: 24 EVQLPRGNDPRGGSYPWGF 42
>05_05_0299 - 23930657-23932627
Length = 656
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 8 ASLKPQPVLPARG*SASGRLTSSHRQRRHTRKRQSK 115
AS +P+ LP A G+ S+ +RR R+R+ K
Sbjct: 601 ASSEPEKELPNEQGDADGKAKSTRSERRKRRRRELK 636
>04_04_0144 - 23095172-23095830,23095915-23097265
Length = 669
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 22 PAGVASSRVISFRKTYLIASPAKTHEKTPI 111
PAG SSRV +R ++A P + +K +
Sbjct: 518 PAGAPSSRVAGYRAPEVVADPWRLSQKADV 547
>03_06_0042 +
31247084-31247641,31248396-31248482,31248684-31248779,
31248897-31248998,31249455-31249541,31249692-31249759,
31249879-31249963
Length = 360
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 31 VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQL-DCVQPNAY 156
V SSR +R L+AS ++ P EG+ + + D P A+
Sbjct: 57 VISSRGFPYRSLRLLASERSAGKRLPFEGQEYTVQDLAAPGAF 99
>02_04_0217 +
20992238-20992397,20992488-20992792,20992910-20993038,
20993476-20993631
Length = 249
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 56 SGRLTSSHRQRRHTRKR-QSKAGLSNWTVC 142
S LTSS RR RKR S +NW +C
Sbjct: 134 SSNLTSSSSNRRSHRKRGHSSMESNNWVLC 163
>11_04_0203 -
14828009-14828110,14828171-14828269,14828375-14828461,
14828733-14829111,14829214-14829377,14829544-14829636,
14829843-14829989,14830065-14830166,14830392-14830490,
14830669-14830803,14830928-14831006,14831111-14831186,
14831281-14831370,14831723-14831798,14831880-14831914,
14832303-14832377,14832468-14832840
Length = 736
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 216 HISVRISSGQTFLPSNQGFRVSVRLHTVQLERPAFDWRFLVCLRWR 79
H S R+ + +L FR+ +R V+ A D R+ C+R+R
Sbjct: 376 HYSFRVYASVLYLKLPAYFRIILRGEEVKHHYIASDLRYTQCIRYR 421
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 37 SSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITW 177
+S+++S +KT +PA KT I GR L + PN L+ W
Sbjct: 197 TSQLLSAKKT----NPAAHSSKTEIGGRNAILKLLSPNLIRSSLLLW 239
>11_02_0051 + 7776312-7780228,7780627-7780695,7781920-7781979,
7782225-7782324,7782720-7782801,7782928-7782940,
7783621-7783681
Length = 1433
Score = 26.2 bits (55), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 111 DWRFLVCLRWRCDEVSLPE 55
+W+ + C+RW+ EVS P+
Sbjct: 1281 NWQKIECIRWKLIEVSKPD 1299
>04_03_1016 +
21742060-21742219,21742301-21742596,21742705-21742758,
21743480-21743503
Length = 177
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 53 ASGRLTSSHRQRRHTRKRQSKAGLSNWTVC 142
+S +SS +R H +K S NW +C
Sbjct: 131 SSSSTSSSSSKRSHKKKGHSDTESKNWVIC 160
>02_05_0733 +
31309835-31310434,31314138-31314254,31314364-31314806,
31316831-31317137
Length = 488
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +3
Query: 42 EGDQLQEDLPHRIASEDTRENANRRQAFPIG---LCAAERLP 158
EGDQ++ED RI ++ +++ R + G +C+A+ P
Sbjct: 96 EGDQMKEDKKGRIKGKEKKDDKARERKGEAGFIFMCSAKTKP 137
>01_03_0286 -
14657682-14657803,14658194-14658419,14659894-14659899,
14661218-14661298,14662498-14662888,14663207-14663352,
14665455-14665562
Length = 359
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 169 ITWKKRLSGADPNADVTDFDRRITAGPD 252
+TWK+RL D V RR+ AG D
Sbjct: 199 LTWKERLRSRDGLFSVVACGRRLVAGRD 226
>10_03_0022 -
7143112-7143698,7144022-7144070,7145171-7145283,
7147732-7147825
Length = 280
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 33 CQLEGDQLQEDLPHRIASEDTRENANRRQAFPIGLCAAER 152
CQ +G+Q E +P R+ ++D E+ + + I AE+
Sbjct: 147 CQDKGEQWDEAIPRRVDAQDGFESREKEEDEKIDQQLAEQ 186
>04_04_1156 -
31319747-31320085,31320556-31320706,31320795-31321026,
31321121-31321331,31321646-31321764,31321835-31322032,
31322163-31322364,31322456-31322832,31322937-31323007,
31326264-31326329,31326414-31326479,31326761-31326835,
31326944-31327018,31327115-31327186,31327683-31327904,
31328012-31328083,31328425-31328496,31329410-31329481,
31329716-31329896,31332132-31332237
Length = 992
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 90 LRWRCDEVSLPEADHPRAGNTGWGFS 13
LR++ DEV+L +A + G WG S
Sbjct: 402 LRYQSDEVNLGDASYYITGEPTWGVS 427
>03_02_0326 +
7474352-7474448,7474913-7474977,7475105-7475191,
7475393-7475440,7476086-7476142,7476588-7476687,
7476875-7477185,7477298-7477667,7478745-7478876,
7479362-7479575,7479650-7479710,7480098-7480292
Length = 578
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 27 RCCQLEGDQLQEDLPHRIAS 86
R C+ EG L +DL H+IA+
Sbjct: 272 RICKQEGSDLTDDLVHQIAT 291
>10_08_0913 + 21527267-21527377,21528290-21528742
Length = 187
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -3
Query: 105 RFLVCLRWRCDEVSLPEADHPRAGNTGW 22
R ++C WR +L E +HP A + W
Sbjct: 3 RNILCQSWRRGAYALQEGNHPGALHACW 30
>07_03_1192 +
24698355-24698433,24699312-24699391,24700027-24700483,
24700641-24700794,24700878-24701155,24701225-24701517
Length = 446
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 226 DRRITAGPDGNLYFTIVTKED 288
D +TAGPDGN+ ++ K+D
Sbjct: 363 DLLMTAGPDGNVQSELLFKKD 383
>07_01_0624 + 4651995-4654715
Length = 906
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 202 PNAD-VTDFDRRITAGPDGNL 261
PN+D VTD RR++ DGNL
Sbjct: 530 PNSDGVTDGSRRVSLQKDGNL 550
>04_03_0930 -
20891334-20891511,20891958-20892109,20892737-20893169,
20893592-20893708,20894099-20894196
Length = 325
Score = 25.4 bits (53), Expect = 9.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 102 FLVCLRWRCDEVSLPEADHPRAGNTGWGFSEALV 1
FLV L + ++V+L A + G T GFS A+V
Sbjct: 65 FLVALPYGLEKVNLNIAGIAKVGGTVLGFSGAMV 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,099,508
Number of Sequences: 37544
Number of extensions: 162377
Number of successful extensions: 493
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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