Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_K11
         (308 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              34   3e-04
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            21   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   5.9  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    20   7.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   7.8  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 34.3 bits (75), Expect = 3e-04
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = +1

Query: 1   YQCFAETPAGVAS-SRVISFR-KTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLIT 174
           Y C AE  AG AS S  ++       I  P    +K   +G   +++C + + +PKP +T
Sbjct: 656 YVCTAENAAGTASHSTTLTVNVPPRWILEPT---DKAFAQGSDARVEC-KADGFPKPQVT 711

Query: 175 WKKRLSGADPNADVTD 222
           WKK  +  D   D TD
Sbjct: 712 WKK--AAGDTPGDYTD 725



 Score = 33.9 bits (74), Expect = 5e-04
 Identities = 24/102 (23%), Positives = 37/102 (36%)
 Frame = +1

Query: 1   YQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITWK 180
           Y C A +PAG   SR ++ R           +++  I G    L CV P+     +    
Sbjct: 79  YSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRGNSAILKCVVPSFVADFVKVLS 138

Query: 181 KRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYK 306
                 +      D+D +    P G L+   V  ED    Y+
Sbjct: 139 WHTDQGEEFVPGDDYDGKYLVLPSGELHIRDVGPEDGYKTYQ 180


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 115 GRPFQLDCVQPNAYPKPLITWKK 183
           GR     C+    +P+P ITW K
Sbjct: 37  GRKITFFCMA-TGFPRPEITWLK 58


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 1   YQCFAETPAGVASSRV 48
           Y+C A  P G AS+ +
Sbjct: 308 YRCSASNPGGEASAEI 323



 Score = 21.0 bits (42), Expect = 3.4
 Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
 Frame = +1

Query: 1   YQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIE---GRPFQLDCVQPNAYPKPLI 171
           Y C A  PA    + V    K  +   P    E T +     +   L C Q    P P I
Sbjct: 687 YTCVAANPA----AEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVALHC-QAQGVPTPTI 741

Query: 172 TWKK 183
            WKK
Sbjct: 742 VWKK 745


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 1   YQCFAETPAGVASSRV 48
           Y+C A  P G AS+ +
Sbjct: 308 YRCSASNPGGEASAEI 323



 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 130 LDCVQPNAYPKPLITWKK 183
           L C Q    P P I WKK
Sbjct: 725 LHC-QAQGVPTPTIVWKK 741


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -3

Query: 135 VQLERPAFDWRFLVCLRW 82
           V L  P +DW   + L+W
Sbjct: 255 VPLSHPTYDWFEKLELKW 272


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 125 SNWTVCSRTL 154
           +NW +C R+L
Sbjct: 26  NNWRICDRSL 35


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 106 PIEGRPFQL 132
           PI G+PFQ+
Sbjct: 101 PISGKPFQI 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,131
Number of Sequences: 438
Number of extensions: 1519
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)