Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_K07
         (368 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot...    31   1.5  
X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain pro...    31   1.5  
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot...    31   1.5  

>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain
           protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 257 LQLIYPSASASPKTAIAGPALIMPFLMLRPIFSIFLKTFHFGSGAA 120
           L+L+    SA P+T  +GP L++  L+L P   + L+ F  G  AA
Sbjct: 693 LKLVRTGGSAQPETPYSGPGLLIDSLVLLPRV-LVLEMFSGGDAAA 737


>X79683-1|CAA56130.1| 1798|Homo sapiens beta2/S laminin chain
           protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 257 LQLIYPSASASPKTAIAGPALIMPFLMLRPIFSIFLKTFHFGSGAA 120
           L+L+    SA P+T  +GP L++  L+L P   + L+ F  G  AA
Sbjct: 693 LKLVRTGGSAQPETPYSGPGLLIDSLVLLPRV-LVLEMFSGGDAAA 737


>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain
           protein.
          Length = 1798

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 257 LQLIYPSASASPKTAIAGPALIMPFLMLRPIFSIFLKTFHFGSGAA 120
           L+L+    SA P+T  +GP L++  L+L P   + L+ F  G  AA
Sbjct: 693 LKLVRTGGSAQPETPYSGPGLLIDSLVLLPRV-LVLEMFSGGDAAA 737


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,933,963
Number of Sequences: 237096
Number of extensions: 456966
Number of successful extensions: 1167
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)