Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_K07
         (368 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L42512-1|AAC41608.1| 1212|Drosophila melanogaster shortsighted c...    27   7.7  
AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-P...    27   7.7  
AE014134-2212|ABI31313.1| 1097|Drosophila melanogaster CG5461-PF...    27   7.7  
AE014134-2211|AAF53201.2| 1206|Drosophila melanogaster CG5461-PA...    27   7.7  

>L42512-1|AAC41608.1| 1212|Drosophila melanogaster shortsighted class
            2 protein.
          Length = 1212

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 130  QAQPKQSTKPEPERTRRKISLRSSSLNIVNFN 35
            Q QP+Q  +P P       S  +S+LN+ N N
Sbjct: 940  QQQPQQQQQPLPPANIASASANNSNLNLTNTN 971


>AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-PA,
            isoform A protein.
          Length = 1338

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -2

Query: 139  ISAQAQPKQSTKPE-PERTRRKISLRSSSLNIVNFNKRNIEL 17
            +SAQ +P+Q T PE P    RKIS   S++++   +K +I+L
Sbjct: 982  LSAQREPQQQTIPEIPPYKTRKIS-AESAMHLNMSDKLHIKL 1022


>AE014134-2212|ABI31313.1| 1097|Drosophila melanogaster CG5461-PF,
           isoform F protein.
          Length = 1097

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 130 QAQPKQSTKPEPERTRRKISLRSSSLNIVNFN 35
           Q QP+Q  +P P       S  +S+LN+ N N
Sbjct: 830 QQQPQQQQQPLPPANIASASANNSNLNLTNTN 861


>AE014134-2211|AAF53201.2| 1206|Drosophila melanogaster CG5461-PA,
            isoform A protein.
          Length = 1206

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 130  QAQPKQSTKPEPERTRRKISLRSSSLNIVNFN 35
            Q QP+Q  +P P       S  +S+LN+ N N
Sbjct: 939  QQQPQQQQQPLPPANIASASANNSNLNLTNTN 970


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,555,608
Number of Sequences: 53049
Number of extensions: 146891
Number of successful extensions: 493
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)