Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_K01
         (398 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK093503-1|BAC04187.1|  637|Homo sapiens protein ( Homo sapiens ...    35   0.11 
AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens ...    30   3.3  

>AK093503-1|BAC04187.1|  637|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36184 fis, clone TESTI2026925. ).
          Length = 637

 Score = 34.7 bits (76), Expect = 0.11
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 121 LMLP*QSQVSITPLALKKQTQISQSDLSFH-PGRLPKDNHILCGNIFPNLYFYY 279
           L+LP Q  + +T + LKK  Q S+  + F  P  L K NH++CG ++  L+  Y
Sbjct: 566 LLLPEQEALEVTRVFLKKLNQRSRGSVDFPIPDILCKWNHVMCG-LYIGLFAEY 618


>AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46268 fis, clone TESTI4027262. ).
          Length = 230

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 71  PKSPLKGGGVIPPLCMS*CCPDNPRSA 151
           P + ++G G+ PP C+S C P +P SA
Sbjct: 15  PIARVQGPGIPPPACVSHCRPPSPDSA 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,271,951
Number of Sequences: 237096
Number of extensions: 933653
Number of successful extensions: 1347
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)