Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_K01
         (398 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81544-5|CAB04430.2|  323|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AC006744-2|AAF60505.2|  503|Caenorhabditis elegans Cytochrome p4...    26   8.7  

>Z81544-5|CAB04430.2|  323|Caenorhabditis elegans Hypothetical
           protein F49C5.1 protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 232 NHILCGNIFPNLYFYYIH*KFSAI 303
           N  +  NIFPNL+F +I   FS +
Sbjct: 253 NSTITYNIFPNLFFQFITLSFSMV 276


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 151 ITPLALKKQTQISQSDLSFHPGRLPKDNHIL 243
           ++PL   +  +I  S  + H G+LP D H+L
Sbjct: 251 LSPLEESRLCEIKYSLQAHHKGKLPNDAHLL 281


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 22/78 (28%), Positives = 36/78 (46%)
 Frame = +1

Query: 88  GGRCYTPAMYVLMLP*QSQVSITPLALKKQTQISQSDLSFHPGRLPKDNHILCGNIFPNL 267
           G  C T   +V+ +      S+  L   +   +S S++S  PG+      ++C NI  NL
Sbjct: 452 GTSCLTVVAFVMRIVQVVVQSVFILVASRLRSLSASNISNQPGKQIVTFLVVC-NI--NL 508

Query: 268 YFYYIH*KFSAIKSTFFF 321
           + Y+    F  I+S F F
Sbjct: 509 FIYH---TFETIESNFGF 523


>AC006744-2|AAF60505.2|  503|Caenorhabditis elegans Cytochrome p450
           family protein 29A3 protein.
          Length = 503

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 121 LMLP*QSQVSITPLALKKQTQISQSDLSFHPGR-LPKD 231
           +++P  + V+I P+A+ K   I Q+   F P R LP++
Sbjct: 393 VLIPAGANVAIAPMAIHKNANIYQNPDIFDPDRFLPEE 430


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,518,256
Number of Sequences: 27780
Number of extensions: 141119
Number of successful extensions: 208
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)