Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_J23
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 261 2e-70
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 261 2e-70
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 261 2e-70
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 258 2e-69
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 256 1e-68
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 256 1e-68
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 255 1e-68
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 255 1e-68
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 255 1e-68
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 34 0.064
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 32 0.34
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 30 1.0
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 30 1.0
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 30 1.4
Z49071-2|CAA88874.1| 458|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 28 4.2
AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical ... 28 5.6
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 9.7
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 261 bits (640), Expect = 2e-70
Identities = 132/180 (73%), Positives = 151/180 (83%), Gaps = 7/180 (3%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 403
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 404 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVH 580
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 261 bits (640), Expect = 2e-70
Identities = 132/180 (73%), Positives = 151/180 (83%), Gaps = 7/180 (3%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 403
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 404 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVH 580
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 261 bits (640), Expect = 2e-70
Identities = 132/180 (73%), Positives = 151/180 (83%), Gaps = 7/180 (3%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +VVA+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 403
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 404 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVH 580
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 258 bits (633), Expect = 2e-69
Identities = 131/180 (72%), Positives = 150/180 (83%), Gaps = 7/180 (3%)
Frame = +2
Query: 62 IGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAVDG 238
+GINGFGRIGRLVLRA+++K + +V A+NDPFI +DYMVYLFQYDSTHGRFKGTV
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 239 HLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVI 403
+L+V GK KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL GGAKKVI
Sbjct: 66 YLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVI 125
Query: 404 ISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCLAPLAKVIHDNFEIIEGLMTTVH 580
ISAPSADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLMTTVH
Sbjct: 126 ISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVH 185
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 256 bits (626), Expect = 1e-68
Identities = 131/182 (71%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 397
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 398 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHDNFEIIEGLMTT 574
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF IIEGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 575 VH 580
VH
Sbjct: 184 VH 185
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 256 bits (626), Expect = 1e-68
Identities = 131/182 (71%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 397
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 398 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHDNFEIIEGLMTT 574
VIISAPSADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF IIEGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 575 VH 580
VH
Sbjct: 184 VH 185
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 255 bits (625), Expect = 1e-68
Identities = 130/182 (71%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 397
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 398 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHDNFEIIEGLMTT 574
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF IIEGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 575 VH 580
VH
Sbjct: 184 VH 185
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 255 bits (625), Expect = 1e-68
Identities = 130/182 (71%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 397
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 398 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHDNFEIIEGLMTT 574
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF IIEGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 575 VH 580
VH
Sbjct: 184 VH 185
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 255 bits (625), Expect = 1e-68
Identities = 130/182 (71%), Positives = 149/182 (81%), Gaps = 7/182 (3%)
Frame = +2
Query: 56 SKIGINGFGRIGRLVLRASIDKGA-DVVAINDPFIGLDYMVYLFQYDSTHGRFKGTVEAV 232
+ +GINGFGRIGRLVLRA+++K VVA+NDPFI +DYMVYLF+YDSTHG+FKGTV
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 233 DGHLVV--NGK---KIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKK 397
L+V +GK KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL GGAKK
Sbjct: 64 GDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKK 123
Query: 398 VIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCLAPLAKVIHDNFEIIEGLMTT 574
VIISAPSADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF IIEGLMTT
Sbjct: 124 VIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTT 183
Query: 575 VH 580
VH
Sbjct: 184 VH 185
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 34.3 bits (75), Expect = 0.064
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = -3
Query: 450 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIA---WGSL 280
L P T G + ++ ++PPT TPV +TT + PA P G++
Sbjct: 459 LAPPTTPGPTFYPVTTVSTMSPPTT---VTVPTTPTPVPTTTNTPPANPTTATPTTVGTM 515
Query: 279 SENTA---IFFPFTTRCPSTASTVPLKRP*VES 190
+ +T + P TT P+T +T P+ +P V S
Sbjct: 516 TPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPS 548
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 31.9 bits (69), Expect = 0.34
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = -2
Query: 310 LTPWNSMGIPLREHSYLLSVYDEVSIYG-LNGTLETTVSRIILEKVDHVVK-TNERIIDS 137
L + + P L VY+ + Y ++ TLETT+ I + +D+V+K +++
Sbjct: 242 LFEFEKLNNPQNSFPLLYPVYETIQEYSKISETLETTILSGIQKNIDNVIKIAKSAKLNA 301
Query: 136 NNIGTLINR--STEHQATDATKTVNSDFRHD 50
++ L N S ++T A+K + F D
Sbjct: 302 ESVEQLSNMLLSRHSKSTKASKHITGFFNGD 332
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +2
Query: 179 LFQYDSTHGRFKGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVF 349
L+QY+ H R+K T+E + L+ G +A+F+ D + W G ++ + GVF
Sbjct: 496 LYQYNF-HERYK-TLETILYILIAAGPSVAIFTMNDRTGLEWMMTGG--MMYAVGVF 548
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 30.3 bits (65), Expect = 1.0
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -3
Query: 459 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 280
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 793 APETTSTEPPSSSTSPVQTTTITAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 848
Query: 279 SENTAIFFPFTTRCPSTASTVP 214
S +T+ TT P T ST P
Sbjct: 849 SSSTSPVQTTTTTAPETTSTEP 870
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -3
Query: 459 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 280
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 655 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 710
Query: 279 SENTAIFFPFTTRCPSTASTVP 214
S +T+ TT P T ST P
Sbjct: 711 SSSTSPVQTTTTTAPETTSTEP 732
Score = 27.5 bits (58), Expect = 7.4
Identities = 26/82 (31%), Positives = 33/82 (40%)
Frame = -3
Query: 459 ASRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSL 280
A T T +S + T AP T E S NTPV +TT +A P +
Sbjct: 747 APETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS-NTPVQTTTTTA---PETTSTEPP 802
Query: 279 SENTAIFFPFTTRCPSTASTVP 214
S +T+ T P T ST P
Sbjct: 803 SSSTSPVQTTTITAPETTSTEP 824
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = -3
Query: 450 LTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSLSEN 271
+TP T + L A T + P T+ A V ++TP T + P P WG+ +
Sbjct: 627 VTPMTEATGAFLSAGS-TAMTPSTQGTGATGVTMSTPGTMATGTTPMTPTVSVWGTNTPA 685
Query: 270 TAIFFPFTTRCPSTASTVP 214
P T R + P
Sbjct: 686 VTPASPTTIRLADPGAVTP 704
>Z49071-2|CAA88874.1| 458|Caenorhabditis elegans Hypothetical
protein T22C8.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +2
Query: 215 GTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAK 394
G ++ D H V GK+ A+F E IP+ +A E ++ G+ D AHL+ K
Sbjct: 59 GILQNEDQHFV-GGKQFAIFYEHSFGKIPYFKAQNESDPKNGGLPQMGD-LEAHLIQAEK 116
Query: 395 KVIISAPSADAPMFVVGVNLEAYDPSYKV 481
+ + P + V +++E + P +++
Sbjct: 117 DINETIPDENFNGIAV-IDIEEFRPMWEL 144
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -2
Query: 388 STHQVSRSFISGCEHTG*FNNVFSTS---LTPWNSMGIPLREHSYLLSVYDEVSIYGLNG 218
S H + S ++G EH FN S+ W+S R Y S+ DE+ + LNG
Sbjct: 1337 SGHSIRTSSLNGTEHKSYFNKELSSPEGIAVDWSS-----RNVYYADSMNDEIGVASLNG 1391
Query: 217 TLETTV 200
+ ++
Sbjct: 1392 KFKKSL 1397
>AC006603-1|AAF39749.1| 772|Caenorhabditis elegans Hypothetical
protein B0524.4 protein.
Length = 772
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +2
Query: 212 KGTVEAVDGHLVVNGKKIAVFSERDPHAIPWGQAGAEYVVESTGVFTTTDKASAHLVGGA 391
KGT++ +D V GKK+A E G++GA+ G KA A GGA
Sbjct: 707 KGTLKELDAFFVAYGKKLA---EGGKAGNSGGKSGAKNGPGKAGAKNEPGKAGAG--GGA 761
Query: 392 KK 397
KK
Sbjct: 762 KK 763
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.1 bits (57), Expect = 9.7
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = -3
Query: 456 SRLTPTTNMGASALGAEMITFLAPPTK*AEALSVVVNTPVDSTTYSAPA*PHGIAWGSLS 277
S+ T T + S + ++T + PT + + TP +T + S++
Sbjct: 515 SKQTNTISPHLSTITGSIVT--STPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTNSVT 572
Query: 276 ENTA---IFFPFTTRCPSTASTVPLKRP*VES 190
+T + P TT P+T +T P+ +P V S
Sbjct: 573 PSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPS 604
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,892,928
Number of Sequences: 27780
Number of extensions: 305666
Number of successful extensions: 916
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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