Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_J22
         (366 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021487-6|CAA16361.2|  325|Caenorhabditis elegans Hypothetical ...    31   0.33 
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   1.3  
U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical pr...    28   2.4  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    27   5.4  
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AL132876-29|CAF31497.1|  840|Caenorhabditis elegans Hypothetical...    26   7.2  
AL132876-27|CAD21658.1|  906|Caenorhabditis elegans Hypothetical...    26   7.2  
Z99171-4|CAB16313.1|  722|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>AL021487-6|CAA16361.2|  325|Caenorhabditis elegans Hypothetical
           protein Y45F10B.11 protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 0.33
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 249 SLYLTIRQ-KLCAAIAGVALDYVYGHGLSLTDTLFPGFG 362
           SLY    Q +LCA I  +++ ++Y   L  T TLFP  G
Sbjct: 138 SLYYPFNQDELCARITQLSIPFIYIWPLFFTFTLFPALG 176


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = -3

Query: 349 KSVSVRLNPWPYT*SSATPAIAAHSFCLIVKYKEPIAHTIFSSLPAKGTSTPAPEVQSEL 170
           +SVS+  +P P++ S            ++ K +EPI  +  S    + +S     V+++ 
Sbjct: 267 ESVSMNPDPAPHSDSVLVHRSNGQVSVMVTKKEEPIYCSGGSDSSTESSSATPSSVEADT 326

Query: 169 SVRAPSASPRTLELVNSSGSS 107
               PS  P    LV  S SS
Sbjct: 327 PPPIPSHPPARHRLVKKSSSS 347


>U80848-1|AAB37990.3|  389|Caenorhabditis elegans Hypothetical
           protein T10H10.3 protein.
          Length = 389

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -3

Query: 253 KEPIAHT--IFSSLPAKGTSTPAPEVQ 179
           + PIA +  I SS+P   TSTP PE+Q
Sbjct: 41  RSPIAASTLILSSVPPPPTSTPPPEIQ 67


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -3

Query: 217 PAKGTSTPAPEVQ--SELSVRAPSASPRTLELVNSSGSS 107
           P K    P  E+   SE+S RAP A P + +   +SGS+
Sbjct: 798 PPKAQENPTAELPTTSEISGRAPQALPTSSQTPPTSGSA 836


>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
           protein F16B12.6 protein.
          Length = 1392

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 201 EVPFAGSDENIVCAIGSLYLTIRQKLCAAIAGVALDYV 314
           E P A  DE  V + G +YLT+R K    +    L+++
Sbjct: 734 ENPNAYYDEPRVLSTGHVYLTVRHKKLVTVMDHVLEWI 771


>AL132876-29|CAF31497.1|  840|Caenorhabditis elegans Hypothetical
           protein Y105E8A.7b protein.
          Length = 840

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 213 AGSDENIVCAIGSLYLTIRQKLC 281
           +G DEN VC   SLYL    KLC
Sbjct: 752 SGKDEN-VCKSDSLYLCTYSKLC 773


>AL132876-27|CAD21658.1|  906|Caenorhabditis elegans Hypothetical
           protein Y105E8A.7a protein.
          Length = 906

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 213 AGSDENIVCAIGSLYLTIRQKLC 281
           +G DEN VC   SLYL    KLC
Sbjct: 752 SGKDEN-VCKSDSLYLCTYSKLC 773


>Z99171-4|CAB16313.1|  722|Caenorhabditis elegans Hypothetical
           protein F47G4.4 protein.
          Length = 722

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = -3

Query: 304 SATPAIAAHSFCLIVKYKEPIAHTIFSSLPAKGTSTPAPEVQ--SELSV 164
           SA P    HS  L  +++  I    +  LP +G S P P     SEL +
Sbjct: 7   SALPHSTVHSAVLSRRHRSVICAGPYEVLPLEGCSEPLPSTSTLSELPI 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,273,226
Number of Sequences: 27780
Number of extensions: 155533
Number of successful extensions: 508
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)