Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_J16
(404 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 27 0.84
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 27 0.84
SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24 famil... 26 1.9
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 26 1.9
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 25 3.4
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 25 4.5
SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyc... 25 4.5
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 25 5.9
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 25 5.9
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 25 5.9
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 25 5.9
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 25 5.9
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 5.9
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 25 5.9
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 25 5.9
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 25 5.9
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 25 5.9
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 25 5.9
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 25 5.9
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 25 5.9
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 24 7.8
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 24 7.8
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 24 7.8
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 24 7.8
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 27.5 bits (58), Expect = 0.84
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 158 IHSSSLFSYIRLNLV--AMI*HHLRPLLLITSLLAIHSTVQRTRRASKSLICSL 313
+ S+L RLN+ A + +LR ++L T + +ST+ RT+ + L+C L
Sbjct: 579 VRESALRIIGRLNVYNPAYVMPYLRKIMLKTLTILDYSTIIRTKEENAKLLCLL 632
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 27.5 bits (58), Expect = 0.84
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 346 FPYKFNVPPYFSKTNDVPK 402
FPY + PPY S T+++P+
Sbjct: 730 FPYNTSYPPYMSPTSNMPQ 748
>SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 195
Score = 26.2 bits (55), Expect = 1.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 242 TSLLAIHSTVQRTRRASKSLICSLRMSSYTTKASTFLT 355
+S L +H T+ A KS++C SYT+ +T LT
Sbjct: 22 SSTLEVHVTILHVNLA-KSMLCGFIHVSYTSPNNTSLT 58
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 1.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 158 YPPSVPLGNINLFGMHSKPSDIYNGTGCSILTVQ 57
YPP+ N ++ HS + Y+ TG +IL Q
Sbjct: 138 YPPATFENNYSVLPDHSSQPNAYSFTGSNILPTQ 171
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 3.4
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 318 ILKEHIRLFEARRVRWTVEWIAKRLVINNKGLKWCQ-IMATRFKRIYE 178
+LK H LFE+ V+++ + V KGL + ++ T F YE
Sbjct: 343 LLKIHFLLFESFTAESVVDYVRRCFVAFEKGLSLSKGLLPTDFTHGYE 390
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.0 bits (52), Expect = 4.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 324 EDILKEHIRLFEARRVRWTV 265
E+ILK H +LF RW++
Sbjct: 362 ENILKHHDQLFSVEITRWSI 381
>SPAC637.06 |||alpha-1,2-galactosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 25.0 bits (52), Expect = 4.5
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Frame = -1
Query: 209 SWLLDSNGYTKTKNWNGYPPSVPLG---NINLFGMHSKPSDIYNGTGCS 72
+WL G+ + +N YPP G N F + + N GC+
Sbjct: 270 AWLRSGMGFVPLRLFNSYPPGACAGEGENPRFFYNQKEGDFLVNLAGCN 318
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 24.6 bits (51), Expect = 5.9
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -3
Query: 138 WQHQSIWHAFKTFRHIQRNGLQYFDCTKV 52
W H H F ++ Q+N L ++ C K+
Sbjct: 74 WSHCKEAHNFDFYQVKQQNNLDFYACIKL 102
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 24.6 bits (51), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 325 VYHEGEHFPYKF--NVPPYFSKT 387
VYH GE P++F N+ + KT
Sbjct: 3568 VYHNGEIVPFRFTPNIKEFIGKT 3590
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.6 bits (51), Expect = 5.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -3
Query: 387 GFRKVRGNVEFVRKVLAFVVYEDILKEHIRLFEARRVRWTVEWIAKRLVINN 232
GFR V+F+RK+++ +D H RLF + W + + ++L N
Sbjct: 132 GFRNQLDKVQFIRKLMSKANVDDF---HTRLF----ILWMLPYSLRKLKERN 176
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 24.2 bits (50), Expect = 7.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 180 ENKELEWISTFSTSWQHQSIWHAFKTF 100
+N +L W ST + Q QS+W F F
Sbjct: 112 DNCKLIWESTVLSDHQKQSLWTEFIFF 138
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 24.2 bits (50), Expect = 7.8
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = +2
Query: 86 RCICLKVLNACQID*CCQEVLKVDI 160
+ I L ++++ + CC ++LK+D+
Sbjct: 414 KSIYLTIMSSVDFEECCHKLLKIDL 438
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 24.2 bits (50), Expect = 7.8
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Frame = -1
Query: 176 TKNWNGYPPSVPLGNIN-------LFGMHSKPSDIYNG 84
T+N G PPS+ LG ++ H +D+YNG
Sbjct: 373 TENLGGLPPSLVLGGSGERLRDEIVYIAHKMNTDVYNG 410
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 24.2 bits (50), Expect = 7.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 281 RRASKSLICSLRMSSYTTKASTFLTNSTFPLTFLKPMMFLN 403
R + LI + S+ TT STF + S+ + +KP+ L+
Sbjct: 3919 REITTILITASDGSAVTTSLSTFYSASSLASSVVKPLYILS 3959
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,750,420
Number of Sequences: 5004
Number of extensions: 35959
Number of successful extensions: 125
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 138190552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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