Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_J15
(376 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0216 + 15804110-15804284,15804341-15804351 31 0.39
06_03_0795 - 24683023-24683155,24685853-24686057,24686275-246864... 30 0.68
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 29 1.2
07_01_0601 + 4464745-4465010,4465274-4466582 29 1.2
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 2.1
03_02_0269 + 7001891-7002212,7003598-7004037 28 2.1
06_01_0817 - 6185881-6187074 28 2.7
11_04_0321 - 16359390-16359539,16359674-16359746,16360448-163608... 27 3.6
07_03_1160 - 24430240-24431268 27 3.6
03_05_0517 - 25118232-25118730,25119002-25119273 27 3.6
12_02_0219 + 15822050-15824896 27 4.8
03_02_0260 - 6924532-6924757,6925443-6925546,6925729-6926007,692... 27 6.3
02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704 27 6.3
07_03_0202 + 15131001-15131047,15131488-15131754,15131913-151319... 26 8.4
05_07_0043 - 27284814-27285190,27285287-27285488,27285576-272856... 26 8.4
03_02_0259 - 6920472-6920579,6920744-6921022,6921115-6921390,692... 26 8.4
02_01_0138 + 999809-999821,1000456-1001341,1001424-1003221,10037... 26 8.4
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 26 8.4
>12_02_0216 + 15804110-15804284,15804341-15804351
Length = 61
Score = 30.7 bits (66), Expect = 0.39
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 99 SGVPSDGNSDHVVIANPDPFFSQPSNVPSGNYEPISTGPAF 221
SG P+ +H V FF+ SN SGNY + G F
Sbjct: 12 SGSPAPPYKNHTVAGADGWFFNATSNTTSGNYSDWAAGETF 52
>06_03_0795 -
24683023-24683155,24685853-24686057,24686275-24686443,
24686590-24686775,24686916-24687124,24687197-24687362
Length = 355
Score = 29.9 bits (64), Expect = 0.68
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 126 HYCRPMEHHYCPPRELCLRQPW 61
HYCR +E+ YC + L R+ W
Sbjct: 181 HYCRSIENWYCLSKTLAEREAW 202
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
Frame = +3
Query: 153 PFFSQPSNVPSG------NYEPISTGPAFVDFNHPNYPP 251
P FS P+ VP+G ++E ++ P F N PN PP
Sbjct: 875 PGFSAPARVPTGFSSGFSSHEGLNPPPGFSSHNGPNPPP 913
>07_01_0601 + 4464745-4465010,4465274-4466582
Length = 524
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 123 SDHVVIANPDPFFSQPSNVPSGNYEPISTGPA 218
SDH V+ P PF P+++ + + PI T PA
Sbjct: 50 SDHFVLT-PPPFQITPTSIQNSTWLPIPTSPA 80
>11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Frame = +3
Query: 153 PFFSQPSNVPSG------NYEPISTGPAFVDFNHPNYPP 251
P FS P+ VP G ++E ++ P F N PN PP
Sbjct: 932 PGFSAPARVPPGFSSGFSSHEGLNPPPGFSSHNGPNPPP 970
>03_02_0269 + 7001891-7002212,7003598-7004037
Length = 253
Score = 28.3 bits (60), Expect = 2.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 285 SHHGREGCRIAWVDNWDD*NRR 220
+ H R+ R+AW D W D +R+
Sbjct: 62 TEHARQRMRVAWADGWVDGSRK 83
>06_01_0817 - 6185881-6187074
Length = 397
Score = 27.9 bits (59), Expect = 2.7
Identities = 19/43 (44%), Positives = 19/43 (44%)
Frame = +3
Query: 150 DPFFSQPSNVPSGNYEPISTGPAFVDFNHPNYPPKRYDNPLAR 278
DP S PS V S E IS AFV P RY NP R
Sbjct: 137 DPLPSPPSPVVSALLELISALSAFVASTPPLPHNSRYGNPAFR 179
>11_04_0321 -
16359390-16359539,16359674-16359746,16360448-16360845,
16360919-16362673,16362751-16362861,16363745-16363962,
16364088-16364196
Length = 937
Score = 27.5 bits (58), Expect = 3.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 243 YPPKRYDNPLARGGK 287
YPPKRY NP+ G+
Sbjct: 859 YPPKRYSNPVGPAGR 873
>07_03_1160 - 24430240-24431268
Length = 342
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +3
Query: 147 PDPFFSQPSNVPSGNYEPISTGPAFVDFNHPNYPP 251
P P P VP+ N P+ P +P+ PP
Sbjct: 48 PPPLLPTPDVVPNPNQPPLQPTPGVPPLPNPDVPP 82
>03_05_0517 - 25118232-25118730,25119002-25119273
Length = 256
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 150 DPFFSQPSNVPSGNYEPISTGPAFVDFNHPNYPPKRY 260
D FF++ P GN T P VD P P + +
Sbjct: 37 DWFFTRKGESPQGNISKEETAPTGVDVTDPGRPGRAF 73
>12_02_0219 + 15822050-15824896
Length = 948
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 1 DNSDTIRQ*KLSC-FSSSPYWPWLPQTEFTWWTIVV 105
D D +R+ ++ C F+ P WPWL ++ T+V+
Sbjct: 269 DFGDPLRKHEMHCRFTQGPPWPWLAVAS-SYGTLVI 303
>03_02_0260 -
6924532-6924757,6925443-6925546,6925729-6926007,
6926093-6926368,6926460-6926678,6926758-6926926,
6927208-6927382,6927489-6927600,6929566-6929820
Length = 604
Score = 26.6 bits (56), Expect = 6.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 87 VVDNSGVPSDGNSDHVVIANPDPFFSQP 170
V++N +P N HVV+ANP P P
Sbjct: 248 VLENCQLPH-ANHGHVVLANPSPILFYP 274
>02_05_0005 - 24890239-24891419,24891524-24891694,24891810-24892704
Length = 748
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 281 TTGERVVVSLGWIIGMIEIDERRSSAYGFIISARN 177
+TG +V + L W++G E R +A G++ +R+
Sbjct: 233 STGGKVPLVLDWVVGKKTCREARRNATGYMCVSRD 267
>07_03_0202 +
15131001-15131047,15131488-15131754,15131913-15131940,
15132120-15132179,15132570-15132696,15132907-15133724
Length = 448
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +3
Query: 75 NRVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNVP----SGNYEPISTGPAFVDFN 233
NR+HV+D + V I+ PDP +P + P S P + +F +FN
Sbjct: 19 NRLHVLDPPCPSPVAAGEKVSISAPDPISHKPVSRPKVPVSDGNAPNAISKSFFNFN 75
>05_07_0043 -
27284814-27285190,27285287-27285488,27285576-27285650,
27285743-27285816,27285909-27285996,27286081-27286203,
27288374-27288580,27288631-27288636
Length = 383
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 108 PSDGNSDHVVIANPDPFFSQ--PSNVPSGNYEPISTG 212
PS +S + + P FSQ P N+ S PISTG
Sbjct: 275 PSSNSSTLLEMETPRKPFSQITPGNISSAPVRPISTG 311
>03_02_0259 -
6920472-6920579,6920744-6921022,6921115-6921390,
6921473-6921691,6921795-6921963,6922248-6922422,
6922490-6922601,6923343-6923573
Length = 522
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 87 VVDNSGVPSDGNSDHVVIANPDPFFSQP 170
V++N +P N HV++ANP P P
Sbjct: 240 VLENCQLPHP-NHGHVILANPSPILCYP 266
>02_01_0138 +
999809-999821,1000456-1001341,1001424-1003221,
1003716-1003805,1004034-1004111,1004513-1004518,
1004849-1004958,1005174-1005369
Length = 1058
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 122 IAVRWNTTIVHHVNSV 75
IA RW T ++HHVNS+
Sbjct: 507 IAGRWLTQMLHHVNSL 522
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 135 VIANPDPFFSQPSNVP---SGNYEPISTGPAFVDF 230
VIA PF S P+ VP +GN +S P+ + F
Sbjct: 684 VIAGKTPFLSVPAKVPFAEAGNAYAVSKFPSLLSF 718
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,265,188
Number of Sequences: 37544
Number of extensions: 207989
Number of successful extensions: 528
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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