Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_J08
         (445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    26   0.21 
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    26   0.21 
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    25   0.37 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    25   0.49 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.5  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   3.5  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.5  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   8.0  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   8.0  

>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -3

Query: 287 LMHGSEHSGKVVCFVR*HGLLGPRTDRWCGWGLCDDLVGLVY 162
           L+H    +GK + F+   G +    +++ GW +  +   LV+
Sbjct: 2   LLHNKTLAGKALAFIAEEGYVPSMREKFLGWNVPPEYSDLVH 43


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 289 GVCTEGNQCVCN 324
           G+C EG QC CN
Sbjct: 77  GICAEGMQCSCN 88


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -3

Query: 287 LMHGSEHSGKVVCFVR*HGLLGPRTDRWCGWGLCDDLVGLV 165
           L+H    +GK + F+   G +    +++ GW +  +   LV
Sbjct: 2   LLHNKTLAGKALAFIAEEGYVPSMREKFLGWNVPPEYSDLV 42


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 253 CVLSVNMASLDRGQIVGAVGGYVMIWLVWFM 161
           C+  V   +   G +   VGG+V  WL +F+
Sbjct: 294 CINRVARETKTAGTLAVVVGGFVACWLPFFI 324


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 313 CVCNPGYSMDLTD*RC 360
           C C PGY  D+    C
Sbjct: 247 CHCKPGYQADVEKQEC 262


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 199 VGGYVMIWLVWFMRLVER 146
           VGG+++ WL +F   + R
Sbjct: 15  VGGFILCWLPFFTMYLVR 32


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 199 VGGYVMIWLVWFMRLVER 146
           VGG+++ WL +F   + R
Sbjct: 463 VGGFILCWLPFFTMYLVR 480


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 355 RCKPRCAGGCPN 390
           RC  RC   CPN
Sbjct: 45  RCDGRCQRFCPN 56


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 355 RCKPRCAGGCPN 390
           RC  RC   CPN
Sbjct: 45  RCDGRCQRFCPN 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,339
Number of Sequences: 438
Number of extensions: 2899
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)