Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_J05
(577 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.1
U39855-6|AAA81085.1| 132|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z81594-2|CAB04746.1| 416|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical ... 28 5.5
AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical ... 28 5.5
AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical... 27 7.2
AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical ... 27 7.2
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 27 9.5
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 27 9.5
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 27 9.5
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.7 bits (61), Expect = 3.1
Identities = 27/96 (28%), Positives = 36/96 (37%)
Frame = +2
Query: 26 PTYPTSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPPRISFPTSQSPTLR*A 205
PT PT+T +T + T TP T +PT T E P + PT+ + T
Sbjct: 78 PTTPTTT--TTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTT 135
Query: 206 WPNCWTLGATCSIFTANS*RTTTLFSGNDATGLATT 313
T T + T + TTT T TT
Sbjct: 136 TTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTT 171
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 3/85 (3%)
Frame = +2
Query: 29 TYPTSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPP---RISFPTSQSPTLR 199
T T+T T + T TP T +PT T P E P + PT+ +PT
Sbjct: 70 TSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTT-PTTTTETTTTPTTETTTTPTTTTPTTT 128
Query: 200 *AWPNCWTLGATCSIFTANS*RTTT 274
P T T + T + TTT
Sbjct: 129 TTTPTTTTTETTTTPTTTTTETTTT 153
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/92 (27%), Positives = 36/92 (39%)
Frame = +2
Query: 38 TSTRASTNCSA*TATPEDGTRSPTMPHVT*PCLHLELGCPPRISFPTSQSPTLR*AWPNC 217
T+T +T +A T T T + T P T + P + T+ +PT P
Sbjct: 185 TTTTPTTTTTAPTTTTTTPTTTTTTPTTT-TTVPTTTTTTPTTTTTTTTTPTTTTTTPTT 243
Query: 218 WTLGATCSIFTANS*RTTTLFSGNDATGLATT 313
T AT + T + TTT + T TT
Sbjct: 244 TTTPATTTSETTTTTPTTTTQTTTKPTTTTTT 275
>U39855-6|AAA81085.1| 132|Caenorhabditis elegans Hypothetical
protein F18G5.6 protein.
Length = 132
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +3
Query: 228 ERPVQYLR---RILEEQQRYFQVTMQQVLLQPKNWTLRN 335
E+ ++ LR RIL+EQ R QV +QQVL + K + N
Sbjct: 73 EKRIEELRMAQRILDEQLRSKQVAVQQVLTERKPCNVEN 111
>Z81594-2|CAB04746.1| 416|Caenorhabditis elegans Hypothetical
protein T20F10.4 protein.
Length = 416
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 450 FPNTFQNQIKDYIYCEIHLFYDYY 521
F N++ KDYI+ E ++Y YY
Sbjct: 334 FRNSYYESTKDYIFMEEDVYYYYY 357
>AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical
protein Y26D4A.10 protein.
Length = 546
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 450 FPNTFQNQIKDYIYCEIHLFYDYY 521
F N++ KDYI+ E ++Y YY
Sbjct: 334 FRNSYYESTKDYIFMEEDVYYYYY 357
>AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical
protein Y40C7B.3 protein.
Length = 416
Score = 27.9 bits (59), Expect = 5.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 450 FPNTFQNQIKDYIYCEIHLFYDYY 521
F N++ KDYI+ E ++Y YY
Sbjct: 334 FRNSYYESTKDYIFMEEDVYYYYY 357
>AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical
protein B0205.4 protein.
Length = 399
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +3
Query: 219 GH*ERPVQYLRRILEEQQRYFQVTMQQVLLQPKNWTLRNLRL 344
GH + P++Y +R +++ + ++ + W RNL+L
Sbjct: 279 GHVDTPIEYYKRAIQQISKIYENVAFIICSDNVAWARRNLKL 320
>AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical
protein F20H11.1 protein.
Length = 486
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = -3
Query: 101 NESRPPASRFRQSSSYWLSSKLDKSALE 18
N+S P++R R+SS WL SK+D++ ++
Sbjct: 12 NQSSTPSTRSRKSS--WLISKIDENEID 37
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 109 SWRTSPVLRRRGSGRAVRTGSRRSWIS 29
SW +LR G+G A T R W++
Sbjct: 823 SWLRQKILRTEGAGSANTTEKRNGWVN 849
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 109 SWRTSPVLRRRGSGRAVRTGSRRSWIS 29
SW +LR G+G A T R W++
Sbjct: 847 SWLRQKILRTEGAGSANTTEKRNGWVN 873
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 109 SWRTSPVLRRRGSGRAVRTGSRRSWIS 29
SW +LR G+G A T R W++
Sbjct: 833 SWLRQKILRTEGAGSANTTEKRNGWVN 859
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 109 SWRTSPVLRRRGSGRAVRTGSRRSWIS 29
SW +LR G+G A T R W++
Sbjct: 838 SWLRQKILRTEGAGSANTTEKRNGWVN 864
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 109 SWRTSPVLRRRGSGRAVRTGSRRSWIS 29
SW +LR G+G A T R W++
Sbjct: 479 SWLRQKILRTEGAGSANTTEKRNGWVN 505
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 109 SWRTSPVLRRRGSGRAVRTGSRRSWIS 29
SW +LR G+G A T R W++
Sbjct: 543 SWLRQKILRTEGAGSANTTEKRNGWVN 569
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 109 SWRTSPVLRRRGSGRAVRTGSRRSWIS 29
SW +LR G+G A T R W++
Sbjct: 838 SWLRQKILRTEGAGSANTTEKRNGWVN 864
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,772,650
Number of Sequences: 27780
Number of extensions: 254657
Number of successful extensions: 740
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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