BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_J05
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 48 9e-08
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 48 9e-08
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 48 9e-08
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.41
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 1.6
AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein. 23 1.6
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 2.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 5.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 6.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 6.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 6.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 6.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 6.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 6.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 6.6
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 6.6
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 6.6
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 47.6 bits (108), Expect = 9e-08
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 GDVAFVSSADLSNFDESQYELLCLNRDAGGRDSFSNYATCNIAMSPSRTWLS--AKDFLS 174
GDVAFV LS +L + D GGR + + CN+ + P R LS AK
Sbjct: 588 GDVAFVPLTALSEEGVQSKDLALICPD-GGRAEINEWERCNLGLEPPRVILSSGAKSPTV 646
Query: 175 DVSIAHTPLSLAQLLDTRSDLFNIYGEFLKNNNVIFR 285
+ H L+ + L R DL +++G + N++F+
Sbjct: 647 LEELTHGTLAASTLYSKRPDLLHLFGSWSNRPNLLFK 683
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 47.6 bits (108), Expect = 9e-08
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 GDVAFVSSADLSNFDESQYELLCLNRDAGGRDSFSNYATCNIAMSPSRTWLS--AKDFLS 174
GDVAFV LS +L + D GGR + + CN+ + P R LS AK
Sbjct: 588 GDVAFVPLTALSEEGVQSKDLALICPD-GGRAEINEWERCNLGLEPPRVILSSGAKSPTV 646
Query: 175 DVSIAHTPLSLAQLLDTRSDLFNIYGEFLKNNNVIFR 285
+ H L+ + L R DL +++G + N++F+
Sbjct: 647 LEELTHGTLAASTLYSKRPDLLHLFGSWSNRPNLLFK 683
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 47.6 bits (108), Expect = 9e-08
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 GDVAFVSSADLSNFDESQYELLCLNRDAGGRDSFSNYATCNIAMSPSRTWLS--AKDFLS 174
GDVAFV LS +L + D GGR + + CN+ + P R LS AK
Sbjct: 588 GDVAFVPLTALSEEGVQSKDLALICPD-GGRAEINEWERCNLGLEPPRVILSSGAKSPTV 646
Query: 175 DVSIAHTPLSLAQLLDTRSDLFNIYGEFLKNNNVIFR 285
+ H L+ + L R DL +++G + N++F+
Sbjct: 647 LEELTHGTLAASTLYSKRPDLLHLFGSWSNRPNLLFK 683
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 25.4 bits (53), Expect = 0.41
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLENYN 442
+I NN+K + ++N N ++ Y NYN
Sbjct: 314 IISSLSNNYKYSNYNNYNNNYNNYNNYNNNYN 345
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/40 (27%), Positives = 14/40 (35%)
Frame = +1
Query: 148 WLSAKDFLSDVSIAHTPLSLAQLLDTRSDLFNIYGEFLKN 267
WLS F + P+ + D D Y LKN
Sbjct: 416 WLSCSSFFQQFFHCYCPVRFGRKADPNGDYIRRYLPVLKN 455
>AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein.
Length = 88
Score = 23.4 bits (48), Expect = 1.6
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -1
Query: 385 AHSSNTTR*YNIMHSLKFLKVQF--FGCSKTCCIV 287
A S NTT +NI+ ++F + F SK C +V
Sbjct: 26 APSKNTTITHNILRGMQFTDITFGVNKWSKVCIVV 60
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 132 HGYVTCGIVGERVP 91
HG VT G++G R P
Sbjct: 900 HGPVTAGVIGARKP 913
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 189 PHSVELGPTAGH*ERPVQYLRRILEEQQRYFQ 284
P S+ELG A H Q ++++ Q+Y Q
Sbjct: 419 PSSLELGEVAVHDPVFYQLYKKVMNLYQQYQQ 450
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIE 109
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIE 342
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -2
Query: 537 VIDKWCNNHKINVFHNIYNLLFDFEKYLE 451
+I NN+ N ++N Y L+ Y+E
Sbjct: 303 IISSLSNNYNYNNYNNNYKPLYYNINYIE 331
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 354 TSCTVLNFSKSNFS 313
T C +LNF K +FS
Sbjct: 77 TPCELLNFPKRSFS 90
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 88 GRDSFSNYATCNIAMSPSRTWLSAKD 165
G+ FS+Y N+ + S WL D
Sbjct: 274 GKKEFSHYEHQNVFVKNSGQWLREYD 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,945
Number of Sequences: 438
Number of extensions: 3120
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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