Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_J01
(659 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 75 4e-14
01_06_0824 - 32243495-32244319,32244449-32244859 75 5e-14
01_01_1152 + 9170628-9171899 75 5e-14
04_04_0619 + 26652923-26653267,26653440-26654273 68 8e-12
11_02_0011 - 7337618-7338496,7338596-7338991 67 1e-11
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 65 4e-11
11_02_0012 - 7346282-7347136,7347234-7347593 63 2e-10
11_01_0750 - 6315126-6315896,6316371-6316784 62 5e-10
11_01_0771 + 6453130-6454488 58 8e-09
11_02_0014 - 7352619-7352918,7353173-7353418 56 2e-08
11_01_0767 + 6438648-6438809,6439146-6440000 52 3e-07
05_06_0044 - 25150322-25151260 42 4e-04
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 37 0.012
06_03_0551 - 22027441-22028224,22029015-22029344,22029510-220297... 31 1.1
03_05_0350 + 23368111-23368219,23368519-23368526,23368650-233686... 29 3.3
04_04_0050 - 22360294-22361804,22362087-22362378,22363367-223634... 28 5.7
04_03_0260 - 13580396-13582990 28 5.7
04_03_0256 - 13564070-13564456,13564543-13565299,13565734-135665... 28 5.7
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157... 28 5.7
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 7.6
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 75.4 bits (177), Expect = 4e-14
Identities = 33/72 (45%), Positives = 49/72 (68%)
Frame = +2
Query: 443 GKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQD 622
GK E A+ +N+WVE T+ IK ++ P S+D +T+ VL NA+YFKG+W E+FD T+D
Sbjct: 208 GKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKD 267
Query: 623 RPFHVNKDKTIQ 658
FH+ K++Q
Sbjct: 268 GEFHLLDGKSVQ 279
Score = 67.7 bits (158), Expect = 8e-12
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = +2
Query: 455 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFH 634
E +N+WV+ T+ IKN+ P S++ +T+ VL NA+YFKG+W E+FD T+D FH
Sbjct: 464 EVLGQVNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFH 523
Query: 635 VNKDKTIQ 658
+ +++Q
Sbjct: 524 LLDGESVQ 531
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 74.9 bits (176), Expect = 5e-14
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Frame = +2
Query: 155 DKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN--------DNVTKAVFTDLNQK 310
DK++ +S S+ LA L + GE+ D+++ + +V D +
Sbjct: 31 DKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGP 90
Query: 311 VRSIKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVE 487
G ++ AN V++ L +A V D + +E + ++F K EEA IN W E
Sbjct: 91 GDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 488 DHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFHV 637
T RIK+ + ++D +T VL NA+YFKG W+ +FD T D F++
Sbjct: 151 SATAGRIKDFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYL 200
>01_01_1152 + 9170628-9171899
Length = 423
Score = 74.9 bits (176), Expect = 5e-14
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 2/162 (1%)
Frame = +2
Query: 158 KSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPN-DNVTKAVFTDLNQKVRSIKGVD 334
++ I+S S LA +A + GE+ ELL + P+ + ++ T L ++R +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 335 LKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHTNKRIK 511
A V++ G L +FA + + + + +F E+A +N +V D T I+
Sbjct: 119 F--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLIR 176
Query: 512 NLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFHV 637
+++ P+S+DSST VL NA++FKG+W F T PFH+
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHL 218
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 67.7 bits (158), Expect = 8e-12
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = +2
Query: 167 ILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKGVDLKLA 346
+ S + LA LA + GE+ +LL + + + A L ++R+ L A
Sbjct: 23 MFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP--QLSFA 80
Query: 347 NKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTNKRIKNLVD 523
+++ L +F + + ++++F AA +N ++ TN R+ N +
Sbjct: 81 AGIFVDRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATNGRLNNTIS 140
Query: 524 PSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFH 634
P + SST+CVL NA++FK +W +F+ TQ R FH
Sbjct: 141 PGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFH 177
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 66.9 bits (156), Expect = 1e-11
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Frame = +2
Query: 155 DKSVILSAFSVMIPLAQLAIASTGESHDELLK-----AIDFPNDNVTKAVFTDLNQKVRS 319
+K+++ S S+ LA +A + G + DELL ++D ++V +AV L + S
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 320 IKGVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNFGKN-EEAANIINTWVEDHT 496
G + A V+ EL + + + + + NF + + + IN WV T
Sbjct: 90 -GGPRVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSKAT 148
Query: 497 NKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFH 634
NK I ++ S+ T VLVNAIYFKG W F + T FH
Sbjct: 149 NKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFH 194
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/67 (41%), Positives = 45/67 (67%)
Frame = +2
Query: 455 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFH 634
E A+ +N+WV+ T+ IK ++ P S+D +T+ VL NA+YFKG+W E+FD T+D F
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFR 63
Query: 635 VNKDKTI 655
+ K++
Sbjct: 64 LLDGKSV 70
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 63.3 bits (147), Expect = 2e-10
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Frame = +2
Query: 149 NPDKSVILSAFSVMIPLAQLAIASTGESHDELLKAIDFPNDNVTKAVFTDLNQKVRSIKG 328
N +++V+ S S+ LA +A + G + DEL+ + A DL + VR +
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLG-------AASLDDLEESVR--RA 78
Query: 329 VDLKLANKVYIANGNELNDQFAVV--SRDVFNSEVQNLNFGKNEEAANI-INTWVEDHTN 499
V++ LA++ + G ++ V R + +F + +++ IN WV TN
Sbjct: 79 VEVGLADESE-SGGPRVSYACGVWHDERLALKPAYRAADFQRQPKSSRKKINKWVSKATN 137
Query: 500 KRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFH 634
K I+ ++ S+ T VLVNAIYFKG W F +E T FH
Sbjct: 138 KLIREILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFH 182
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +2
Query: 326 GVDLKLANKVYIANGNELNDQFAVVSRDVFNSEVQNLNF-GKNEEAANIINTWVEDHTNK 502
G L A V+ L+ +F ++ +V+ S + +F K E+A + IN+WV+D T
Sbjct: 97 GPRLAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKG 156
Query: 503 RIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFH 634
+ L+ ++D +T VL +A+YF+G W ++ D T ++ F+
Sbjct: 157 TVTTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFY 200
>11_01_0771 + 6453130-6454488
Length = 452
Score = 57.6 bits (133), Expect = 8e-09
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +2
Query: 446 KNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDR 625
K EEA IN W T K I +++ P S+ T VL NAIYFKG W F++ T+ +
Sbjct: 169 KAEEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERK 228
Query: 626 PFH 634
PF+
Sbjct: 229 PFY 231
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/55 (47%), Positives = 31/55 (56%)
Frame = +2
Query: 470 INTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFH 634
IN WV TNK I ++ S+ T VLVNAIYFKG W + F +E T FH
Sbjct: 90 INEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFH 144
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = +2
Query: 455 EAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPF 631
EA IN WV T I ++ P S T+ V+ NAIYFKG W FDK T +R F
Sbjct: 57 EARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREF 115
>05_06_0044 - 25150322-25151260
Length = 312
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Frame = +2
Query: 353 VYIANGNELNDQFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSS 532
V++ LN FA + VF + V++ G A IN W T +K+++ S
Sbjct: 3 VWVDASLRLNPAFADTAASVFKAAVRSA--GNPAAARAEINEWFSSQTGGFVKDILSNSI 60
Query: 533 LDS-----------STQCVLVNAIYFKGSWKEQFDKELTQDRPFHVNKDKTIQ 658
D S L N++YF W F LT++ FHV+ D ++
Sbjct: 61 DDDDDGSGGGGGAISASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVR 113
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 227 ESHDELLKAIDFPNDNVTKAVFTDLNQKVRSI--KGVDLKLANKVYIANGNELNDQFAVV 400
+ HD LLK+ NDN+TK + NQ + + KG D K +KV N+Q +
Sbjct: 467 KEHDTLLKSSVELNDNLTKTA-EERNQILECLKEKGGDNKALHKVIARLQRISNEQEKTI 525
Query: 401 S--RDVFNSEVQNLNFGKNEEAANI 469
+ R FN+E++N + G +E + +
Sbjct: 526 TGLRQGFNAELENKSLGTSESISRM 550
>06_03_0551 -
22027441-22028224,22029015-22029344,22029510-22029778,
22030530-22031453,22037761-22038360,22040049-22040267
Length = 1041
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/65 (21%), Positives = 34/65 (52%)
Frame = +2
Query: 434 LNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKEL 613
L G++ E + N ++D ++ ++V + + + LV+ +Y++ + QFD++
Sbjct: 100 LIIGRDSEVDKLFNL-IKDRSHTNTPHVVSVWGIPGTGRTALVSNVYYRCYYDTQFDRQT 158
Query: 614 TQDRP 628
T + P
Sbjct: 159 TVNMP 163
>03_05_0350 +
23368111-23368219,23368519-23368526,23368650-23368658,
23368768-23368839,23368978-23369097,23369638-23370058,
23370131-23370285,23370461-23370625,23370822-23370825,
23371739-23371799,23371933-23372035,23372422-23372854,
23372978-23373120,23373608-23373740,23375567-23375576,
23375852-23375975,23376595-23377012,23377153-23377343,
23377569-23377811
Length = 973
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 515 LVDPSSLDSSTQCVLVNAIYFKG-SWKEQFD 604
+ DPS + ST C + NAI G WKE D
Sbjct: 483 IFDPSGCEKSTSCSMENAIDHVGQGWKEHND 513
>04_04_0050 -
22360294-22361804,22362087-22362378,22363367-22363420,
22363627-22363718,22364713-22364915,22365892-22366133,
22366205-22366330,22366800-22366907,22367394-22367457,
22367543-22367681,22367867-22368038,22368198-22368482
Length = 1095
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 467 IINTWVEDHTNKRIKNLVDPSSLDSSTQCVLVNAIYFKGSWKEQFDKELTQDRPFHVNKD 646
I + + D T + +++ P + + Q KG +K F K+ T D P H +KD
Sbjct: 301 IASKGLRDDTTCIVIDIIPPEKISPTVQPAKKAG---KGLFKNIFYKKATSDSPCHADKD 357
Query: 647 KTIQ 658
+ Q
Sbjct: 358 QCTQ 361
>04_03_0260 - 13580396-13582990
Length = 864
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 389 FAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 538
F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 737 FGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNNQLIDMIDKHSSD 785
>04_03_0256 -
13564070-13564456,13564543-13565299,13565734-13566535,
13566884-13566917
Length = 659
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 386 QFAVVSRDVFNSEVQNLNFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLD 538
+F VV ++ + +N++ + EEA +IN E N ++ +++D S D
Sbjct: 531 KFGVVLMEIISGR-KNIDISQPEEAVQLINLLREKAQNSQLIDMIDKHSND 580
>01_07_0197 +
41912207-41912652,41913226-41913800,41913828-41915748,
41915836-41916049,41916143-41916394,41916469-41916528,
41916646-41916776,41916898-41917012,41917084-41917239
Length = 1289
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 437 NFGKNEEAANIINTWVEDHTNKRIKNLVDPSSLDSST 547
N K + + + TWV+ ++ + L+D ++LDSST
Sbjct: 490 NKRKRDATSELSETWVQCDACRKWRRLLDGTALDSST 526
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 474 LIMLAASSF--LPKFKFCTSELNTSLDTTAN*SFNSLPLAMYTLLA 343
L++L SF LP C S L SL+ T+N S SLP M L A
Sbjct: 1121 LVILGCPSFSSLPASIRCLSNLK-SLELTSNNSLTSLPEGMQNLTA 1165
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,775,638
Number of Sequences: 37544
Number of extensions: 297088
Number of successful extensions: 757
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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