SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_I24
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK001021-1|BAA91470.1|  268|Homo sapiens protein ( Homo sapiens ...    31   2.1  
DQ010329-1|AAY27263.1|  622|Homo sapiens zinc ion binding protei...    31   2.8  
BC093079-1|AAH93079.1|  622|Homo sapiens DTX2 protein protein.         31   2.8  
BC026059-1|AAH26059.1|  622|Homo sapiens DTX2 protein protein.         31   2.8  
BC018555-1|AAH18555.1|  622|Homo sapiens deltex homolog 2 (Droso...    31   2.8  
BC008856-1|AAH08856.1|  622|Homo sapiens DTX2 protein protein.         31   2.8  
AY225125-1|AAP57519.1|  575|Homo sapiens deltex 2B protein.            31   2.8  
AY225124-1|AAP57518.1|  622|Homo sapiens deltex 2A protein.            31   2.8  
AK023924-1|BAB14727.1|  622|Homo sapiens protein ( Homo sapiens ...    31   2.8  
AC005522-1|AAP21881.1|  410|Homo sapiens unknown protein.              31   2.8  
AB040961-1|BAA96052.1|  740|Homo sapiens KIAA1528 protein protein.     31   2.8  
D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.               30   6.5  
BC057243-1|AAH57243.1|  320|Homo sapiens NAALADL2 protein protein.     29   8.6  
AJ607396-1|CAE54974.2|  295|Homo sapiens putative NAALADL2 prote...    29   8.6  
AJ607395-1|CAE54973.1|  320|Homo sapiens putative NAALADL2 prote...    29   8.6  

>AK001021-1|BAA91470.1|  268|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10159 fis, clone HEMBA1003528. ).
          Length = 268

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -2

Query: 301 PAGPKTLVPYACPSNLPRSSLK-NCRVYPALPNNPSSFCPSVPNTFPLP 158
           P GP+ L P + P + P  S   +    P +P NP    P  P   PLP
Sbjct: 35  PGGPRNLGPTSSPMHRPMLSPHIHPPSTPTMPGNPPGLLPPPPPGAPLP 83


>DQ010329-1|AAY27263.1|  622|Homo sapiens zinc ion binding protein
           protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>BC093079-1|AAH93079.1|  622|Homo sapiens DTX2 protein protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>BC026059-1|AAH26059.1|  622|Homo sapiens DTX2 protein protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>BC018555-1|AAH18555.1|  622|Homo sapiens deltex homolog 2
           (Drosophila) protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>BC008856-1|AAH08856.1|  622|Homo sapiens DTX2 protein protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>AY225125-1|AAP57519.1|  575|Homo sapiens deltex 2B protein.
          Length = 575

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>AY225124-1|AAP57518.1|  622|Homo sapiens deltex 2A protein.
          Length = 622

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>AK023924-1|BAB14727.1|  622|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13862 fis, clone THYRO1001120, moderately
           similar to Homo sapiens deltex (Dx) mRNA. ).
          Length = 622

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>AC005522-1|AAP21881.1|  410|Homo sapiens unknown protein.
          Length = 410

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 325


>AB040961-1|BAA96052.1|  740|Homo sapiens KIAA1528 protein protein.
          Length = 740

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 265 PSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPM 155
           P +LP  S  +  V  +LP+ PSS   SVP T P+ M
Sbjct: 407 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQM 443


>D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.
          Length = 1696

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -3

Query: 486 CPGPRVLSDPPADKRGFLSKFHTPAPLADRFGLP--PICLLISRAA 355
           CP   +L  PP   RG L    +P P  D   +P  P CLL+   A
Sbjct: 30  CP-ELLLIPPPLSNRGILGPVQSPCPSRDPAPIPTEPGCLLVEATA 74


>BC057243-1|AAH57243.1|  320|Homo sapiens NAALADL2 protein protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = +1

Query: 52  MLKSLCHRVIKKGILNIINSRSKPVTLETSRGTRT*ATEKYSVHSDKMTMDYSVKLDTPG 231
           +LK++    IKK   N++        +E S+  +T  T       D   ++YSV LD PG
Sbjct: 151 ILKTIQAEDIKKSFRNLVQLYKNEDDMEISKKIKTQWTSLGL--EDVQFVNYSVLLDLPG 208

Query: 232 SFSMTIAVSWKG 267
               T+ +S  G
Sbjct: 209 PSPSTVTLSSSG 220


>AJ607396-1|CAE54974.2|  295|Homo sapiens putative NAALADL2 protein
           protein.
          Length = 295

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = +1

Query: 52  MLKSLCHRVIKKGILNIINSRSKPVTLETSRGTRT*ATEKYSVHSDKMTMDYSVKLDTPG 231
           +LK++    IKK   N++        +E S+  +T  T       D   ++YSV LD PG
Sbjct: 168 ILKTIQAEDIKKSFRNLVQLYKNEDDMEISKKIKTQWTSLGL--EDVQFVNYSVLLDLPG 225

Query: 232 SFSMTIAVSWKG 267
               T+ +S  G
Sbjct: 226 PSPSTVTLSSSG 237


>AJ607395-1|CAE54973.1|  320|Homo sapiens putative NAALADL2 protein
           protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = +1

Query: 52  MLKSLCHRVIKKGILNIINSRSKPVTLETSRGTRT*ATEKYSVHSDKMTMDYSVKLDTPG 231
           +LK++    IKK   N++        +E S+  +T  T       D   ++YSV LD PG
Sbjct: 151 ILKTIQAEDIKKSFRNLVQLYKNEDDMEISKKIKTQWTSLGL--EDVQFVNYSVLLDLPG 208

Query: 232 SFSMTIAVSWKG 267
               T+ +S  G
Sbjct: 209 PSPSTVTLSSSG 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,703,707
Number of Sequences: 237096
Number of extensions: 2421391
Number of successful extensions: 6094
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6093
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -