Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_I24
         (566 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.9  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   6.5  
AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.             21   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +1

Query: 79  IKKGILNIINSRSKPVTLETSRGTRT*ATEKYSV--HSDKMTMDYSVKLDTPGSFSMTIA 252
           +++ +L++  +  +   L  S   +   +  Y+V  H+      YS  L+      M+ +
Sbjct: 435 LQRCLLSLEKTYERDTCLLASDALKQILSAAYNVELHNSSPFSIYSF-LERLNLIFMSSS 493

Query: 253 VSWKGTHTAPGFWVRQAT 306
           + W  THT    W R+ T
Sbjct: 494 LQWSSTHTLDVAWRRKVT 511


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +1

Query: 79  IKKGILNIINSRSKPVTLETSRGTRT*ATEKYSV--HSDKMTMDYSVKLDTPGSFSMTIA 252
           +++ +L++  +  +   L  S   +   +  Y+V  H+      YS  L+      M+ +
Sbjct: 473 LQRCLLSLEKTYERDTCLLASDALKQILSAAYNVELHNSSPFSIYSF-LERLNLIFMSSS 531

Query: 253 VSWKGTHTAPGFWVRQAT 306
           + W  THT    W R+ T
Sbjct: 532 LQWSSTHTLDVAWRRKVT 549


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 518 ARFLKRMWWFLNFIIC 565
           AR L    W L+F+IC
Sbjct: 182 ARLLVATVWILSFVIC 197


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 113 EASPSP*RRHVGQEHRQRKS 172
           EA P P  +   +EH+++KS
Sbjct: 59  EALPQPISKRKDKEHKKKKS 78


>AB086196-1|BAD06465.1|  289|Apis mellifera Period protein.
          Length = 289

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 113 EASPSP*RRHVGQEHRQRKS 172
           EA P P  +   +EH+++KS
Sbjct: 59  EALPQPISKRKDKEHKKKKS 78


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 328 PGLRSSTVSPAGPKTLVPYACPSNL 254
           PG  SS+ SP+ P +      P++L
Sbjct: 84  PGGGSSSPSPSSPSSFFSSVSPTSL 108


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 219 GYTRQFFNDD 248
           G  RQF+NDD
Sbjct: 223 GIARQFYNDD 232


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 329  LDCSNKNANAALDISKQIGGRP 394
            +DCS ++    L++  Q  G+P
Sbjct: 963  IDCSTQSEYYELEVKDQKNGKP 984


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,830
Number of Sequences: 438
Number of extensions: 4322
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)