Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_I22
(732 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0662 - 12736904-12737214,12737632-12737914 35 0.058
05_04_0214 - 19111493-19112413,19112674-19112750,19113843-191144... 34 0.13
07_03_0927 - 22642670-22643023 33 0.23
09_04_0506 - 18188785-18190599 30 1.6
08_01_0105 + 756998-757225,757311-758597 30 1.6
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.6
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 30 1.6
09_04_0558 - 18504639-18505718 30 2.2
07_01_0439 + 3333654-3334217 30 2.2
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 30 2.2
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 30 2.2
03_05_0215 - 22044146-22045549 30 2.2
11_05_0007 - 18324969-18325063,18326580-18326745,18327078-183272... 29 2.9
05_01_0474 - 3797926-3798609 29 2.9
02_05_1127 + 34292894-34293284,34293948-34295443 29 2.9
11_06_0643 - 25773250-25773843 29 3.8
11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118 29 3.8
10_06_0053 - 10110617-10111271,10112023-10112417,10112565-101126... 29 3.8
01_06_0780 - 31938064-31938127,31940191-31941743 29 3.8
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 29 5.0
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 29 5.0
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 29 5.0
02_02_0547 + 11399769-11399852,11399906-11400088,11400474-114005... 29 5.0
08_02_1227 - 25398063-25398302,25398629-25398790,25399019-253991... 28 6.6
06_03_1346 + 29480482-29480676,29480754-29481067,29481164-294812... 28 6.6
04_03_0098 + 11183039-11183752 28 6.6
02_04_0189 - 20772302-20772814 28 6.6
02_02_0558 + 11477433-11477525,11477632-11477973,11481854-114823... 28 6.6
06_03_0577 + 22461831-22462023,22462378-22463160,22463380-224649... 28 8.8
04_04_0969 - 29787617-29787919,29788019-29788180,29788962-297890... 28 8.8
03_05_0663 + 26546810-26547304 28 8.8
02_05_0544 + 29876337-29876524,29876850-29876882,29878390-298785... 28 8.8
01_07_0058 + 40799547-40799810,40799942-40799978,40800279-408003... 28 8.8
01_06_1154 - 34955235-34955827,34955912-34956045,34956142-349563... 28 8.8
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 28 8.8
01_05_0445 + 22318179-22318229,22321063-22321659,22321795-223221... 28 8.8
>02_02_0662 - 12736904-12737214,12737632-12737914
Length = 197
Score = 35.1 bits (77), Expect = 0.058
Identities = 33/101 (32%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +1
Query: 145 PLQPSAPVAAPLYSAPPGYPGVQAHPGGGA--GIWADASXXXXXXXXXXXXXDCSGEPLY 318
PL PS A+PL PP PG H G GA A + D EP+
Sbjct: 11 PLLPSP--ASPLPEPPPAKPGSYKHGGSGALSPSLAVKAVGVPARQSSGPGADVEEEPMA 68
Query: 319 VARAQHEGATLPGKLVPSHGCAYIPWGGLEHGKPNYQILVG 441
V+R+ GA + G P G + +P GG E G + L G
Sbjct: 69 VSRS---GARMHGSCSPMAG-SVVP-GGKEPGTDGHGRLAG 104
>05_04_0214 -
19111493-19112413,19112674-19112750,19113843-19114412,
19114605-19114754,19115499-19115643
Length = 620
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 PITHFGVRTGWGSQGHWRISHFTKAGSQPLQPSAPVAAPLYS-APPGYPGVQ 213
P+T ++ W WR+S S LQPS +AA L + APP P VQ
Sbjct: 124 PMTSEAIKFIWKHVLRWRLSALPANASSSLQPSDHLAAALAAVAPPPPPAVQ 175
>07_03_0927 - 22642670-22643023
Length = 117
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 334 HEGATL-PGKLVPSHGCAYIP-WGGLEHGKP---NYQILVGGPNNWVPTHGANIPPGAFP 498
HEG L PG G Y+P G++H P + Q L G + WVP G +P P
Sbjct: 53 HEGTVLIPGLGRFELGSTYVPDITGVDHSVPAAEHGQFLPGADDTWVPNPGFEVPNPFQP 112
Query: 499 GGET 510
G +
Sbjct: 113 GSSS 116
>09_04_0506 - 18188785-18190599
Length = 604
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/31 (54%), Positives = 17/31 (54%)
Frame = +1
Query: 145 PLQPSAPVAAPLYSAPPGYPGVQAHPGGGAG 237
P QP PVAA APP P Q PGGG G
Sbjct: 131 PPQPQPPVAA----APPPPPHNQIQPGGGDG 157
>08_01_0105 + 756998-757225,757311-758597
Length = 504
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 YVARAQHEGATLPG-KLVPSHGCAYIPWGGLEHGKPNYQILVG 441
Y RA H GA++P + P +G L G+PN +LVG
Sbjct: 418 YPRRAHHRGASMPSVRAHPGRISCDAGFGYLHSGEPNPNVLVG 460
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 154 PSAPVAAPLYSAPPGYPGVQAHPGGGAGI 240
P P AP PPG PG P GG G+
Sbjct: 1198 PPTPPGAPAPPMPPGVPGGPPPPPGGRGL 1226
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 596 QTPCDCCTLPVVTLPSCRTRPTNRGSPSSVSPPG 495
Q+PC C +P+V++ C T T+ G S + P G
Sbjct: 192 QSPCCCANVPLVSVSCCSTGQTS-GVSSCMQPSG 224
>09_04_0558 - 18504639-18505718
Length = 359
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 145 AVSRLW*NERSSSGLESPSLCALRSALSEKVRDPPTP 35
AV LW R GL SP A A + PPTP
Sbjct: 4 AVRELWAESRDLLGLHSPDDAAAADAAMPRAEMPPTP 40
>07_01_0439 + 3333654-3334217
Length = 187
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +1
Query: 142 QPLQPSAPVAAPLYSAPPGYPGVQAHPGGGAG 237
QPL S P P S PP P V A GGG G
Sbjct: 29 QPLIVSPPPPPPPASRPPKKPRVVASGGGGGG 60
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +1
Query: 100 QGHWRI-SHFTKAGSQPLQP----SAPVAAPLYSAPPGYPGVQAHPGGGAGIWADA 252
QG+ ++ S A P+QP S P A PL P G P ++PG AG A A
Sbjct: 226 QGNPQVPSQAQAAPPPPVQPAGGASGPNANPLNLFPQGIPSAGSNPGAAAGAGAGA 281
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 130 KAGSQPLQPSAPVAAPLYSAPPGYPGVQAHPGG 228
+ +P QP+ P P APP YP GG
Sbjct: 381 RVAGKPPQPAVPPGPPAVPAPPTYPPADPAAGG 413
>03_05_0215 - 22044146-22045549
Length = 467
Score = 29.9 bits (64), Expect = 2.2
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = -3
Query: 277 HPVGPGHLKRLPRCQHHHQDALEHQGNQAGRCTVEQPLE-RTVAV-------AVSRLW*N 122
HPV LK LP C +H E GN ++ PLE R+V + AV+ L
Sbjct: 126 HPVPSPLLKALPPCTYHD----EGDGND---LSMRYPLEFRSVGILCRGEEFAVAELQ-V 177
Query: 121 ERSSSGLESPSLCALRSALS 62
R++SG LC LRSA+S
Sbjct: 178 LRTASGRVKARLCVLRSAIS 197
>11_05_0007 - 18324969-18325063,18326580-18326745,18327078-18327275,
18327377-18327643,18328070-18328129,18328767-18329033,
18329156-18329359,18329441-18331496,18332517-18333358
Length = 1384
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 370 SH-GCAYI--PWGGLEHGKPNYQILVGGPNNWVPTHGANIPPGAFP 498
SH G YI PWGG G+ NY+I +G HG P G FP
Sbjct: 1278 SHDGLQYILGPWGG--GGENNYKINLGPSEFITKVHGTFGPFGEFP 1321
>05_01_0474 - 3797926-3798609
Length = 227
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 55 PFPITHFGVRTGWGSQGHWRISHFTKAGSQPLQPSAPVAAPLYSAPPGYPGVQAHPGGGA 234
P + F V G S G ++ G+ PS V PL + PP Y GGG
Sbjct: 33 PLAVPSFRVYYGVASAGSVPFLWESQPGTPKSSPSTAVLPPL-TPPPSYYASAGKKGGGG 91
Query: 235 G 237
G
Sbjct: 92 G 92
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 127 TKAGSQPLQPSAPVAAPLYSAPPGYPGVQAHPGGGAGIWADAS 255
+++ S+ +P AP AP P P +AHP WA+A+
Sbjct: 32 SRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASPRASWAEAA 74
>11_06_0643 - 25773250-25773843
Length = 197
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 109 WRISHFTKAGSQPLQPSAPVAAPLYSAPPGYPGVQAHPGGGAGIWADAS 255
WR+S + S P PS+P +P S+PP P A P A +W +S
Sbjct: 102 WRLSSPPTSSSAP--PSSP--SPGASSPPCLPTSPAIPSPRASVWWSSS 146
>11_04_0050 - 12819929-12820468,12820606-12820824,12820900-12821118
Length = 325
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 554 PSCRTRPTNRGSPSSVSPPGKAP 486
P+ TRPT RG P S+ PG P
Sbjct: 38 PALPTRPTVRGRPPSLQRPGSPP 60
>10_06_0053 -
10110617-10111271,10112023-10112417,10112565-10112650,
10112973-10113021,10114164-10114290,10114372-10114526,
10114730-10114948
Length = 561
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 320 LPERNTRAQLCQENWCHRTDVPIYH 394
+P R+ R LC++ WCH +YH
Sbjct: 387 MPRRSAR--LCRDRWCHHLARDVYH 409
>01_06_0780 - 31938064-31938127,31940191-31941743
Length = 538
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 148 LQPSAPVAAPLYSAPPGYPGVQAHPGGGAGIWADAS 255
L+P+ PV PL APP P Q G+G +D+S
Sbjct: 324 LEPADPVPPPLGLAPPVPPPPQGDDPDGSGSESDSS 359
>10_05_0011 -
7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/69 (31%), Positives = 28/69 (40%)
Frame = +1
Query: 388 IPWGGLEHGKPNYQILVGGPNNWVPTHGANIPPGAFPGGETEDGEPLFVGRVRHEGSVTT 567
I GG G N QIL G +W HGA++ +F G +R GSV
Sbjct: 85 ISLGGSRLGS-NSQILNNGNPHWEQHHGASLGTSSFANGAVYSN---IQNLMRPMGSVNN 140
Query: 568 GKVQQSHGV 594
Q SH +
Sbjct: 141 KVNQSSHSL 149
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +1
Query: 460 PTHGANIPPGA--FPGGETEDGEPLFVGRVRHEGSVTTGKVQ 579
P G PPG +PG + G+P V H+G+ G Q
Sbjct: 8 PGRGGGAPPGMTPWPGPPPQPGQPAVVYTALHQGAYQPGVAQ 49
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 133 AGSQPLQPSAPVAAPLYSAPPGYPGVQAHP 222
A QP P P P PPG PG HP
Sbjct: 299 AAPQPWGPPQPWGPPPSHLPPGGPGYGGHP 328
>02_02_0547 +
11399769-11399852,11399906-11400088,11400474-11400578,
11400690-11400773,11400938-11401053,11401158-11401259,
11401339-11401452,11401540-11401596,11401681-11401873,
11402261-11402335,11402425-11402460,11402509-11402574,
11402575-11402688
Length = 442
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = -1
Query: 390 YIGTSVRWHQFSWQSCAL--VLRSGNVQWFSRTILPSDYCTRWD 265
Y G + W +F W A+ +R W+++ L D R+D
Sbjct: 164 YDGRTTEWDEFEWSKRAIHVSVRKQTKWWYAKRFLHPDVVARYD 207
>08_02_1227 -
25398063-25398302,25398629-25398790,25399019-25399150,
25399909-25399961,25400465-25400942
Length = 354
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 160 APVAAPLYSAPPGYPGVQAHPGGGAGIWADA 252
APV+A + SAPPGY A G GA AD+
Sbjct: 46 APVSAAV-SAPPGYQPGGAAGGNGAAALADS 75
>06_03_1346 +
29480482-29480676,29480754-29481067,29481164-29481236,
29481517-29481627,29481725-29481899,29481992-29482119,
29482310-29482370,29482893-29482963
Length = 375
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 348 SCALVLRSGNVQWFSRTILPSDYCTRWDLA 259
SCALV R NV T+ YC RW L+
Sbjct: 149 SCALVCRFMNVVASDETLWRRLYCMRWGLS 178
>04_03_0098 + 11183039-11183752
Length = 237
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 10 DRSSGAVIMEWVDPVPFPITHFGVRTGWGSQGH---WRISH 123
D+S GAV+ +PFP G +G GS GH W +SH
Sbjct: 40 DKSGGAVVSGSKFSLPFPSKAAGSGSGSGS-GHGFGWMVSH 79
>02_04_0189 - 20772302-20772814
Length = 170
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +1
Query: 76 GVRTGWGSQGHWRISHFTKAGSQPLQPSAPVAAPLYSAPPGYPGVQAHPGGGAG 237
G R G G G W + AG P PS P P + P P + PGGG G
Sbjct: 76 GARDGDGD-GDWSVD-LLLAGL-PCSPSPP-CLPSLAIEPSLPCRRRRPGGGGG 125
>02_02_0558 +
11477433-11477525,11477632-11477973,11481854-11482381,
11482459-11482956
Length = 486
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 138 AGFGEMRDPPVALRAPACAHSEVRYRKRYGIHPLHNDS 25
AG +R PP+ A +S R Y HPL N+S
Sbjct: 201 AGVAPLRLPPLPPATAAATYSSRRREGGYSWHPLRNNS 238
>06_03_0577 +
22461831-22462023,22462378-22463160,22463380-22464936,
22465082-22465449
Length = 966
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 90 LGLSRPLEDLSFHQSRLTATATVRSSGCSTVQ 185
LGL + L+ L F Q++LT + GC +++
Sbjct: 462 LGLLKNLQGLDFSQNKLTGEIPISIGGCQSLE 493
>04_04_0969 -
29787617-29787919,29788019-29788180,29788962-29789093,
29789708-29789760,29790518-29791007
Length = 379
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 139 SQPLQPSAPVAAPLYSAPPGYPGVQAHPGGGAG 237
S P++P A ++ +Y P G+Q PG G G
Sbjct: 59 SSPMKP-ADMSGTMYRTDPVVQGMQQQPGSGGG 90
>03_05_0663 + 26546810-26547304
Length = 164
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 184 SAPPGYPGVQAHPGGGAGI 240
S PGYPG GGG GI
Sbjct: 46 SVQPGYPGTNPGGGGGGGI 64
>02_05_0544 +
29876337-29876524,29876850-29876882,29878390-29878577,
29879755-29879811,29879909-29880061,29880812-29881278,
29881477-29881635,29881718-29881834,29881966-29882117,
29883436-29883530,29883619-29884525,29884604-29884688,
29884775-29884843,29885045-29885224,29885367-29885495
Length = 992
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 457 VPTHGANIPPGAFPGGETEDG 519
+P H +PP A PGG E G
Sbjct: 31 IPIHPIEVPPTAVPGGPREPG 51
>01_07_0058 +
40799547-40799810,40799942-40799978,40800279-40800362,
40800563-40800615
Length = 145
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 151 QPSAPVAAPLYSAPPGYPGVQAHPGGGAG 237
QPSAP+A+P S+PP V A G G
Sbjct: 28 QPSAPLASPAPSSPPRPRSVAAAAAYGYG 56
>01_06_1154 -
34955235-34955827,34955912-34956045,34956142-34956389,
34956431-34956901
Length = 481
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 483 WDISTMRGHPVVRATYENLVIRFAMFKTTPWYIGTSVRWHQFSW--QSCALVLRSGNV 316
+DI T +G +V Y + + T P++ G V+ H+ W ++ A+++ NV
Sbjct: 107 FDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTGKVVQRHRAGWEAEAAAVLMMYSNV 164
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 485 GGILAPCVGTQLLGPP 438
GG+L PC G L GPP
Sbjct: 497 GGLLKPCKGVLLFGPP 512
>01_05_0445 +
22318179-22318229,22321063-22321659,22321795-22322187,
22323410-22323481
Length = 370
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 557 LPSCRTRPTNRGSPSS-VSPPGKAPG 483
LP+C P + G+PSS SPP K G
Sbjct: 37 LPACSDEPISSGTPSSPSSPPTKETG 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,597,122
Number of Sequences: 37544
Number of extensions: 634637
Number of successful extensions: 2431
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2422
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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