Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_I16
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       52   2e-09
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.40 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.6  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   4.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 52.4 bits (120), Expect = 2e-09
 Identities = 19/44 (43%), Positives = 31/44 (70%)
 Frame = +2

Query: 332 DVDGIQYVINFDYPNSSEDYIHRIGRTGRSKAKGTSYAFFNPSK 463
           D+  + +VIN+D P   ++Y+HRIGRTGR   +G + +FF+P +
Sbjct: 516 DIKNVSHVINYDLPKGIDEYVHRIGRTGRVGNRGRATSFFDPEE 559


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 403 NSMNVILRGIGIIKINHILDSIHIGKHLYII 311
           N MN+I +G  +I++ +I+D     ++ Y I
Sbjct: 386 NEMNIITKGKPLIRVENIIDLEGAPQNFYYI 416


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 411 QEDPKLKELHMHSLTHP 461
           Q  P  ++LH H  THP
Sbjct: 806 QSQPPHQQLHHHQSTHP 822


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -1

Query: 389 NPQRNWDNQN*SHIGFHPHR*TFIYYMVYKSINLL 285
           +P+  + NQN +H   H H  T +   +  ++++L
Sbjct: 110 DPKNQYKNQNNNHYTSHQHLRTHLRGTLTVNVSVL 144


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,557
Number of Sequences: 438
Number of extensions: 3177
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)