Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_I15
         (414 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for ...   212   5e-55
BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32 p...   212   5e-55
BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32 p...   212   5e-55
AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32 p...   212   5e-55
BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.       114   1e-25
BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.      37   0.030
BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.      35   0.12 
U35113-1|AAA78935.1|  715|Homo sapiens mta1 protein.                   32   0.66 
BC142941-1|AAI42942.1|  715|Homo sapiens metastasis associated 1...    32   0.66 
BC009443-1|AAH09443.2|  263|Homo sapiens MTA1 protein protein.         32   0.66 
X62320-1|CAA44196.1|  593|Homo sapiens Epithelin 1 & 2 protein.        29   4.6  
BC010577-1|AAH10577.1|  593|Homo sapiens granulin protein.             29   4.6  
AY124489-1|AAM94026.1|  593|Homo sapiens PC cell-derived growth ...    29   4.6  
AK222522-1|BAD96242.1|  593|Homo sapiens granulin variant protein.     29   4.6  
AK023348-1|BAB14535.1|  413|Homo sapiens protein ( Homo sapiens ...    29   4.6  
AF055008-1|AAC09359.1|  593|Homo sapiens epithelin 1 and 2 protein.    29   4.6  
D86981-1|BAA13217.1|  681|Homo sapiens KIAA0228 protein protein.       29   6.1  
BC018121-1|AAH18121.1|  585|Homo sapiens amyloid beta precursor ...    29   6.1  
AF017782-1|AAC83973.1|  585|Homo sapiens PAT1 protein.                 29   6.1  
BC013284-1|AAH13284.1|  276|Homo sapiens LOC642031 protein protein.    29   8.1  

>X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for
           ribosomal protein L32. ).
          Length = 135

 Score =  212 bits (517), Expect = 5e-55
 Identities = 98/117 (83%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   RTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFR 181
           RTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSGFR
Sbjct: 16  RTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFR 75

Query: 182 KVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 352
           K LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRVTN  ARLRS+
Sbjct: 76  KFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSE 132


>BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  212 bits (517), Expect = 5e-55
 Identities = 98/117 (83%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   RTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFR 181
           RTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSGFR
Sbjct: 16  RTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFR 75

Query: 182 KVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 352
           K LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRVTN  ARLRS+
Sbjct: 76  KFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSE 132


>BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  212 bits (517), Expect = 5e-55
 Identities = 98/117 (83%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   RTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFR 181
           RTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSGFR
Sbjct: 16  RTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFR 75

Query: 182 KVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 352
           K LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRVTN  ARLRS+
Sbjct: 76  KFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSE 132


>AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score =  212 bits (517), Expect = 5e-55
 Identities = 98/117 (83%), Positives = 107/117 (91%)
 Frame = +2

Query: 2   RTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPSGFR 181
           RTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGSNKKT+HMLPSGFR
Sbjct: 16  RTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFR 75

Query: 182 KVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVERAQQLSIRVTNAAARLRSQ 352
           K LVHNV+ELE+L+M N+ YCAEIAH VSSK RKAIVERA QL+IRVTN  ARLRS+
Sbjct: 76  KFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSE 132


>BC015974-1|AAH15974.1|  107|Homo sapiens RPS29 protein protein.
          Length = 107

 Score =  114 bits (274), Expect = 1e-25
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = +2

Query: 119 MPNIGYGSNKKTRHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAIVER 298
           MPNIGYG NKKT+H+LPSGF K LVHNV+ELE+L++ N+ YC EI H VSSK  KAI+ER
Sbjct: 27  MPNIGYGRNKKTKHILPSGFWKFLVHNVKELEVLLVSNKSYCVEITHDVSSKNCKAILER 86

Query: 299 AQQLSIRVTNAAARLRS 349
           A Q+ IRVTNA A L S
Sbjct: 87  AAQVVIRVTNANASLHS 103


>BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.
          Length = 33

 Score = 36.7 bits (81), Expect = 0.030
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = +2

Query: 2  RTKRFIRHQSDRYDKLKR 55
          RTK+FIRHQSDRY K+KR
Sbjct: 16 RTKKFIRHQSDRYVKIKR 33


>BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.
          Length = 82

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +2

Query: 2  RTKRFIRHQSDRYDKLK 52
          RTK+FIRHQSDRY K+K
Sbjct: 16 RTKKFIRHQSDRYVKIK 32


>U35113-1|AAA78935.1|  715|Homo sapiens mta1 protein.
          Length = 715

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +2

Query: 50  KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 172
           KR++ +  G+D  +++R     LMP+ G  ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618


>BC142941-1|AAI42942.1|  715|Homo sapiens metastasis associated 1
           protein.
          Length = 715

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +2

Query: 50  KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 172
           KR++ +  G+D  +++R     LMP+ G  ++ +TRHM PS
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 618


>BC009443-1|AAH09443.2|  263|Homo sapiens MTA1 protein protein.
          Length = 263

 Score = 32.3 bits (70), Expect = 0.66
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +2

Query: 50  KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPS 172
           KR++ +  G+D  +++R     LMP+ G  ++ +TRHM PS
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS 166


>X62320-1|CAA44196.1|  593|Homo sapiens Epithelin 1 & 2 protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 272 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 159
           +RR  +  PR I C   +  PV + C P L    W  C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467


>BC010577-1|AAH10577.1|  593|Homo sapiens granulin protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 272 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 159
           +RR  +  PR I C   +  PV + C P L    W  C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467


>AY124489-1|AAM94026.1|  593|Homo sapiens PC cell-derived growth
           factor protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 272 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 159
           +RR  +  PR I C   +  PV + C P L    W  C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467


>AK222522-1|BAD96242.1|  593|Homo sapiens granulin variant protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 272 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 159
           +RR  +  PR I C   +  PV + C P L    W  C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467


>AK023348-1|BAB14535.1|  413|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13286 fis, clone OVARC1001154, highly similar to
           Homo sapiens clone 24720 epithelin 1 and 2 mRNA. ).
          Length = 413

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 272 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 159
           +RR  +  PR I C   +  PV + C P L    W  C
Sbjct: 251 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 287


>AF055008-1|AAC09359.1|  593|Homo sapiens epithelin 1 and 2 protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 272 SRRRHVRFPRSISCSASSGSPVRERCGPRLYENRWVAC 159
           +RR  +  PR I C   +  PV + C P L    W  C
Sbjct: 431 ARRASLSHPRDIGCDQHTSCPVGQTCCPSL-GGSWACC 467


>D86981-1|BAA13217.1|  681|Homo sapiens KIAA0228 protein protein.
          Length = 681

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 155 RHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAI 289
           RH+L   F+ ++ H V+   +L     + C+ IA   ++ K KAI
Sbjct: 172 RHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI 216


>BC018121-1|AAH18121.1|  585|Homo sapiens amyloid beta precursor
           protein (cytoplasmic tail) binding protein 2 protein.
          Length = 585

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 155 RHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAI 289
           RH+L   F+ ++ H V+   +L     + C+ IA   ++ K KAI
Sbjct: 76  RHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI 120


>AF017782-1|AAC83973.1|  585|Homo sapiens PAT1 protein.
          Length = 585

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +2

Query: 155 RHMLPSGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKAI 289
           RH+L   F+ ++ H V+   +L     + C+ IA   ++ K KAI
Sbjct: 76  RHLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAAVKEKAI 120


>BC013284-1|AAH13284.1|  276|Homo sapiens LOC642031 protein protein.
          Length = 276

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +1

Query: 193 PQRSRTGDPDDAEQEILRGNRTWRLLEKTEGYSRACPAAQHQGDQRGRSSPFPG 354
           P+RS  G P    + +LR  +  RL+E  E      P+    G  R +  P  G
Sbjct: 110 PRRSLLGQPSRPRRSLLRPRQPQRLVEAPEQPGPLTPSLLGPGRPRQQKQPLMG 163


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,778,603
Number of Sequences: 237096
Number of extensions: 1257140
Number of successful extensions: 2750
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2750
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)