Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_I14
         (436 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro...    29   6.9  
AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.               29   6.9  
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.     29   6.9  
X78565-1|CAA55309.1| 2201|Homo sapiens human tenascin-C protein.       29   9.1  
X56160-1|CAA39628.1| 2199|Homo sapiens tenascin protein.               29   9.1  
M55618-1|AAA88083.1| 2203|Homo sapiens hexabrachion protein.           29   9.1  
BC132719-1|AAI32720.1| 1044|Homo sapiens CCDC129 protein protein.      29   9.1  
AL162425-1|CAI15110.1| 2201|Homo sapiens tenascin C (hexabrachio...    29   9.1  
AB210038-1|BAE06120.1| 2233|Homo sapiens TNC variant protein pro...    29   9.1  

>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
           thrombospondin repeats (type 1 and type 1-like),
           transmembra protein.
          Length = 1151

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 253 PGPVPKHMGWLYTANDSPEHQLRCGWRPG 339
           P PV  H+  +    D+P  QLRCGW  G
Sbjct: 7   PSPVAHHL--VPGPPDTPAQQLRCGWTVG 33


>AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.
          Length = 1092

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 253 PGPVPKHMGWLYTANDSPEHQLRCGWRPG 339
           P PV  H+  +    D+P  QLRCGW  G
Sbjct: 7   PSPVAHHL--VPGPPDTPAQQLRCGWTVG 33


>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
          Length = 1202

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 253 PGPVPKHMGWLYTANDSPEHQLRCGWRPG 339
           P PV  H+  +    D+P  QLRCGW  G
Sbjct: 58  PSPVAHHL--VPGPPDTPAQQLRCGWTVG 84


>X78565-1|CAA55309.1| 2201|Homo sapiens human tenascin-C protein.
          Length = 2201

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 148 CCCKPGGGKSNKSSASCLGRCDLPRHKCLE 237
           C C+PG    N S   C G C L R +C++
Sbjct: 174 CVCEPGWKGPNCSEPECPGNCHL-RGRCID 202


>X56160-1|CAA39628.1| 2199|Homo sapiens tenascin protein.
          Length = 2199

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 148 CCCKPGGGKSNKSSASCLGRCDLPRHKCLE 237
           C C+PG    N S   C G C L R +C++
Sbjct: 174 CVCEPGWKGPNCSEPECPGNCHL-RGRCID 202


>M55618-1|AAA88083.1| 2203|Homo sapiens hexabrachion protein.
          Length = 2203

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 148 CCCKPGGGKSNKSSASCLGRCDLPRHKCLE 237
           C C+PG    N S   C G C L R +C++
Sbjct: 174 CVCEPGWKGPNCSEPECPGNCHL-RGRCID 202


>BC132719-1|AAI32720.1| 1044|Homo sapiens CCDC129 protein protein.
          Length = 1044

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = -3

Query: 302 ESFAVYNQPICLGTGPGLTSYFSK--HLCLGRSQRPKQLAEDLLDFPPPGL 156
           E F  + +P   G     TS   K  HL L    +  Q  +DLL +PP GL
Sbjct: 282 EVFVPFTKPWDCGAELAATSINHKQNHLSLSVEHQSLQACDDLLPYPPHGL 332


>AL162425-1|CAI15110.1| 2201|Homo sapiens tenascin C (hexabrachion)
           protein.
          Length = 2201

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 148 CCCKPGGGKSNKSSASCLGRCDLPRHKCLE 237
           C C+PG    N S   C G C L R +C++
Sbjct: 174 CVCEPGWKGPNCSEPECPGNCHL-RGRCID 202


>AB210038-1|BAE06120.1| 2233|Homo sapiens TNC variant protein
           protein.
          Length = 2233

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 148 CCCKPGGGKSNKSSASCLGRCDLPRHKCLE 237
           C C+PG    N S   C G C L R +C++
Sbjct: 206 CVCEPGWKGPNCSEPECPGNCHL-RGRCID 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,926,346
Number of Sequences: 237096
Number of extensions: 1554493
Number of successful extensions: 2530
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2525
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)