Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_I12
(468 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 3.8
U88169-13|AAO12405.1| 148|Caenorhabditis elegans Hypothetical p... 28 3.8
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 3.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 6.7
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 8.9
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 8.9
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 132 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 248
V A P P F+ P+ P PI GPAF P P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 28.3 bits (60), Expect = 2.9
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 132 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 248
V A P P F+ P+ P P+ GPAF P P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 63 WLRNRVHVVDNSGVPSDGN--SDHVVIANPDPFFSQPSNGPSGNY 191
W RN VH+ D S P D +D+ + N + S SNG S +Y
Sbjct: 2 WPRNDVHMDDGSMTPEDQEPVTDNDMEYNDNGEESSYSNGSSSSY 46
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 63 WLRNRVHVVDNSGVPSDGN--SDHVVIANPDPFFSQPSNGPSGNY 191
W RN VH+ D S P D +D+ + N + S SNG S +Y
Sbjct: 2 WPRNDVHMDDGSMTPEDQEPVTDNDMEYNDNGEESSYSNGSSSSY 46
>U88169-13|AAO12405.1| 148|Caenorhabditis elegans Hypothetical
protein T03F1.12 protein.
Length = 148
Score = 27.9 bits (59), Expect = 3.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 55 YGHGCATEFTWWTIVVFHRT 114
Y H T+FTWW + V T
Sbjct: 100 YNHALPTQFTWWILQVISTT 119
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 3.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 63 WLRNRVHVVDNSGVPSDGN--SDHVVIANPDPFFSQPSNGPSGNY 191
W RN VH+ D S P D +D+ + N + S SNG S +Y
Sbjct: 2 WPRNDVHMDDGSMTPEDQEPVTDNDMEYNDNGEESSYSNGSSSSY 46
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.1 bits (57), Expect = 6.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 90 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 215
D SG P G DP +QPS GP G + P P+
Sbjct: 291 DPSGAPPSGGPPGPF----DPSGAQPSGGPPGPFNPSGAPPS 328
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +3
Query: 141 NPDPFFSQP--SNGPSGNYEPISTGPAFVDFNHPNYPPKRYDNPL 269
+P PF + P SN S P F + PP R +PL
Sbjct: 90 SPPPFMTSPATSNNSVSVARKTSAPPGFAQYEPDTAPPSRSTSPL 134
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 144 PDPFFSQPSNGPSGNYEPIS 203
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 8.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 144 PDPFFSQPSNGPSGNYEPIS 203
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,883,158
Number of Sequences: 27780
Number of extensions: 194174
Number of successful extensions: 519
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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