Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_I08
(557 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 28 1.1
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 1.9
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 3.3
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 26 3.3
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 26 3.3
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 26 4.3
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 25 5.7
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 25 5.7
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 25 5.7
SPAC18G6.01c |||conserved fungal protein|Schizosaccharomyces pom... 25 5.7
SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|c... 25 5.7
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 25 7.5
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 25 7.5
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 25 7.5
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 25 7.5
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 27.9 bits (59), Expect = 1.1
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 2 QPYPQPNYPNTHNEPYNP*---QPTKLSEPIAI*NYGNATKRHYHISATT*SVLPTS*TK 172
Q + Q + N+ P +P QP LS A + H+H S+++ +V PTS T
Sbjct: 85 QKHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAA-----SQHHHHHSSSSSYAVSPTSPTS 139
Query: 173 PTRS 184
PT S
Sbjct: 140 PTSS 143
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 PRPDPFYQP-HKPNQPDHHITPNRTNDLSSVQGGHVNGQNTQLSLNVLNRASMEFARKAI 311
P P F H P Q TP R++D S ++ ++ + +R + A KAI
Sbjct: 542 PLPSNFKDKGHVPQQRSVSYTPKRSSDTSESLQPSLSFASSNVLSEPFDRKVADLAMKAI 601
Query: 312 NVSAIPDIL 338
N I +L
Sbjct: 602 NSKRINKLL 610
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 153 YQPHKPNQPDH-HITPNRTNDLSSVQGGHVNGQNTQLSLNVLNRASMEFARKAINVSA 323
Y +K QP +++ + ND + GGH N N Q NV + + + N +A
Sbjct: 766 YNNNKFGQPQQGYMSQSGFNDFPPIFGGHSNVYNRQQPGNVSGMSGTQTSNPINNATA 823
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 26.2 bits (55), Expect = 3.3
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 432 PMLQMQRLGPEQSPLGHPPAQRGLHLQSVRSIEYPGLQTH*LPSVQTPLMHGSEH 268
P+L +R+ E + +Q +L + I+YP LPS LMH H
Sbjct: 181 PVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCH 235
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = +2
Query: 266 ECSEPCINGVCTEGNQCVCNPGYSMDLTD*RCKPRC 373
+C E C N C +G C G D C +C
Sbjct: 330 DCGEDCENNPCCDGKTCKLTKGSLCDDQQDACCYQC 365
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 4.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 135 PRPDPFYQPHKPNQPDHHITPNRTNDLSSV 224
P D FY PH P + PN LS+V
Sbjct: 590 PLHDKFYVPHSPPKYTMETYPNNVLSLSTV 619
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 25.4 bits (53), Expect = 5.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 289 WSLHGRQSMCLQSRIFYGSYRLKVQAPLCRWMS 387
W LH ++ L +F G YR + P+C +S
Sbjct: 448 WRLHKLRNDSLIVDLFQGMYRSTLVCPVCNTVS 480
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 25.4 bits (53), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 127 VIVPFGSITIISYCDGFG*FGWLL 56
V++ F + + SYC +G GW++
Sbjct: 367 VMIVFSCLFLFSYCCSWGPMGWVI 390
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 5.7
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 127 VIVPFGSITIISYCDGFG*FGWLL 56
V++ F + + SYC +G GW++
Sbjct: 367 VMIVFSCLFLFSYCCSWGPMGWVI 390
>SPAC18G6.01c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 25.4 bits (53), Expect = 5.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 189 ITPNRTNDLSSVQGGHVNGQNTQLSLN 269
I P R + S ++GG V G +++S N
Sbjct: 141 IVPTRNTNFSHLRGGFVRGLQSRMSQN 167
>SPBC106.11c |plg7||phospholipase A2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 438
Score = 25.4 bits (53), Expect = 5.7
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 387 GHPPAQRGLHLQSVRSIEYPGLQTH*LPSVQTPLMHGSEHSGKVVCFVR*HGLLGPR 217
G P +G +R+ GL LP + L H ++GK+ F+ HGL+G R
Sbjct: 75 GIPEVAKGFRWWLLRAFA-SGLTNLALPVYKGELFH-PPNNGKLPVFIFSHGLVGSR 129
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 7.5
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 526 FLVSLRGSN*GISLFALHTLRDTSHTRVYMVAHVTNAKIRS*TESIGTST 377
F+ +L+G F H L+ S T ++ VA +TN R SIG+ST
Sbjct: 6 FIFNLKGDTLICKTFR-HDLKK-SVTEIFRVAILTNTDYRHPIVSIGSST 53
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 146 SVLPTS*TKPTRSSHNPQPHQRSVLGPR 229
S++P KPT+ H P + +L PR
Sbjct: 997 SIIPIKPNKPTKPDHLVAPRVKPLLPPR 1024
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +2
Query: 257 TFPECSEPCI-NGVCTEGNQCVCNPGY 334
+FP C N +C N C PGY
Sbjct: 363 SFPSLCRTCPPNAICPSPNYVECKPGY 389
Score = 24.6 bits (51), Expect = 10.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +2
Query: 386 PNGLCSGPNLCICNMGY 436
PN +C PN C GY
Sbjct: 373 PNAICPSPNYVECKPGY 389
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.0 bits (52), Expect = 7.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 105 MLPNGTITYQPRPDPFYQPHKPNQPDHHITPNRT 206
M P T QP+ F QP + N P + P RT
Sbjct: 461 MQPQRTGMMQPQRTGFSQPFESNNPFPVMQPQRT 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,406,112
Number of Sequences: 5004
Number of extensions: 53144
Number of successful extensions: 146
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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