Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_I03
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U29377-3|AAA68720.2|  472|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AL033514-36|CAH19095.1|  222|Caenorhabditis elegans Hypothetical...    27   7.5  

>Z83218-6|CAI58632.1|  273|Caenorhabditis elegans Hypothetical
           protein C31A11.10 protein.
          Length = 273

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
 Frame = +2

Query: 332 YSWFFFVCCTFYIKYM*REPSVLCI-----LYYFLIPLNSVNTTLWIIHSYFTPVGSVTY 496
           + WFF +C     +Y+      + I        FL  +N   TT W++H   T   +V +
Sbjct: 126 FVWFFIICIVSIDQYILFGVCDVVIDTPLDCDSFLCAMNQCYTTYWLLHERITTFSNVFF 185

Query: 497 G*IVDKALCVERH 535
             +V   L +  H
Sbjct: 186 SAVVTFRLFIWNH 198


>U29377-3|AAA68720.2|  472|Caenorhabditis elegans Hypothetical
           protein K05F1.5 protein.
          Length = 472

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 116 HCSLCQTGFNIQGL 75
           HC+ CQTGF I GL
Sbjct: 82  HCAKCQTGFEIVGL 95


>AL033514-36|CAH19095.1|  222|Caenorhabditis elegans Hypothetical
           protein Y75B8A.39 protein.
          Length = 222

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -2

Query: 334 ISISVREDPPWFHCTCCDFQLLLMTLMVNLDSNNKILQFVNYTYSNLR 191
           ++I+ R     F+C  C F +  M L   +   ++IL  +N  Y NLR
Sbjct: 141 VTIATRYSRAKFNCDMCFFSVKAMILEYEIRKCHQILDLLNQIY-NLR 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,728,009
Number of Sequences: 27780
Number of extensions: 245534
Number of successful extensions: 510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)