Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_I02
         (570 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.9  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   4.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   6.5  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   8.6  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   8.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   8.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.6  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 101 FFFCYMNFHLSLITYI 148
           FF C+  FH+  + Y+
Sbjct: 269 FFICWAPFHVQRLLYV 284


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 493 RNSSATLKSVQSTKAQVTCNYKQ 425
           RN   T    Q T   V C+YKQ
Sbjct: 113 RNEEYTGDDCQKTYQYVQCHYKQ 135


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 98  VFFFCYMNFHLSLITYI 148
           +FF C+  FH   + Y+
Sbjct: 278 LFFICWAPFHTQRLLYV 294


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 105 KNTG*NLTIRKIKKCIYDY 49
           KN    LT +K  +C+ DY
Sbjct: 106 KNEDKCLTAQKFSRCVIDY 124


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 68  FIFLIVKFYPVFFFCY 115
           F F I+KF PV +  Y
Sbjct: 507 FTFNIIKFVPVKYLTY 522


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 68  FIFLIVKFYPVFFFCY 115
           F F I+KF PV +  Y
Sbjct: 560 FTFNIIKFVPVKYLTY 575


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 234 NKPNYCTEKYPLSNS 190
           N+P+YCT +   +NS
Sbjct: 7   NRPSYCTWELNATNS 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,480
Number of Sequences: 438
Number of extensions: 2181
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)