Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_H24
         (441 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    31   0.018
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    31   0.018
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   0.52 
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   2.1  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   8.4  
AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subu...    22   8.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   8.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   8.4  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 31.1 bits (67), Expect = 0.018
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +1

Query: 49  IGHAAEQSSRGGIWCVLRTRILSSLNHQRS*RNYEPISTGPASSINHPNYPPSDTTPSPV 228
           +G+  E  S  G W        +S+  + +  N  P S+  ++S+NH N   S   PS +
Sbjct: 479 LGNRDEPHSSSGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSI 538

Query: 229 V 231
           V
Sbjct: 539 V 539


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 31.1 bits (67), Expect = 0.018
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +1

Query: 49  IGHAAEQSSRGGIWCVLRTRILSSLNHQRS*RNYEPISTGPASSINHPNYPPSDTTPSPV 228
           +G+  E  S  G W        +S+  + +  N  P S+  ++S+NH N   S   PS +
Sbjct: 480 LGNRDEPHSSSGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSI 539

Query: 229 V 231
           V
Sbjct: 540 V 540


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 26.2 bits (55), Expect = 0.52
 Identities = 15/62 (24%), Positives = 22/62 (35%)
 Frame = -3

Query: 226  RERVSYRWVDNWDD*STTPVQCLWVHNSARTVDG*EKKGSGFAIHTIFHHVNSVRQHGQY 47
            R+R    W   WD  + T     W H   R +   + +  G      FH    +  HG +
Sbjct: 937  RQRTITMWQSQWDAEADTSRYTRWTHRIIRDISAWQGRRHG---EMTFHLAQVLSGHGFF 993

Query: 46   GE 41
             E
Sbjct: 994  RE 995


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 61  AEQSSRGGIWCVLRTRILSSLNHQRS*RNYEPISTGPASSINHPNYPP 204
           AE +  GG + V    ++S+L   R  +  +PI  G   S   PN+PP
Sbjct: 365 AEDNEFGGGYRV----VMSTLRGSRVPQEKDPIELGRIVSDLFPNHPP 408


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 184 NHPNYPPSDTTPSP 225
           N P  PP+D TP+P
Sbjct: 792 NAPFTPPTDRTPTP 805


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 42  KKKHESFHCRIGRV 1
           K+KH S  C+IGR+
Sbjct: 400 KRKHHSKLCKIGRL 413


>AY787484-1|AAV87217.1|   70|Anopheles gambiae GABA receptor subunit
           protein.
          Length = 70

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 253 YLMRHYFPPRERVSYRWVDNWDD*STTPVQ 164
           YL++ Y P    V   WV  W + + TP +
Sbjct: 1   YLIQIYIPSGLIVIISWVSFWLNRNATPAR 30


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 115 SSLNHQRS*RNYEPISTGPASSINHPNYPPS 207
           SSLN         P    P S++ HP+ P S
Sbjct: 605 SSLNLSHPSAGMVPQPPPPGSALGHPSIPTS 635


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 88  WCVLRTRILSSLNHQRS 138
           +CV  + +LS LNH+RS
Sbjct: 743 FCVDPSSLLSPLNHKRS 759


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,098
Number of Sequences: 2352
Number of extensions: 7660
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)