Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_H24
(441 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 1.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.5
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 1.5
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 2.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 2.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 2.6
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 3.4
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 3.4
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 4.5
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 4.5
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 4.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 6.0
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 253 YLMRHYFPPRERVSYRWVDNWDD*STTPVQ 164
YL++ Y P V WV W D S P +
Sbjct: 244 YLIQIYIPCCMLVIVSWVSFWLDQSAVPAR 273
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 1.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3
Query: 253 YLMRHYFPPRERVSYRWVDNWDD*STTPVQ 164
YL++ Y P V WV W D S P +
Sbjct: 244 YLIQIYIPCCMLVIVSWVSFWLDQSAVPAR 273
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.0 bits (47), Expect = 1.5
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 33 VSSSPYWPCCRTEFTWW 83
V + Y P C + TWW
Sbjct: 150 VPFTTYTPVCEYDHTWW 166
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 253 YLMRHYFPPRERVSYRWVDNWDD*STTPVQ 164
YL++ Y P V WV W + + TP +
Sbjct: 223 YLIQIYIPSGLIVIISWVSFWLNRNATPAR 252
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 253 YLMRHYFPPRERVSYRWVDNWDD*STTPVQ 164
YL++ Y P V WV W + + TP +
Sbjct: 223 YLIQIYIPSGLIVIISWVSFWLNRNATPAR 252
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 22.2 bits (45), Expect = 2.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 253 YLMRHYFPPRERVSYRWVDNWDD*STTPVQ 164
YL++ Y P V WV W + + TP +
Sbjct: 162 YLIQIYIPSGLIVIISWVSFWLNRNATPAR 191
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 3.4
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 98 CEPGSFLLSTINGPSGIMNP 157
C+ FL++ +GP + NP
Sbjct: 173 CDHVQFLITNTSGPGVVSNP 192
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 3.4
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 98 CEPGSFLLSTINGPSGIMNP 157
C+ FL++ +GP + NP
Sbjct: 173 CDHVQFLITNTSGPGVVSNP 192
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHNYNKLYYNINY 348
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 6.0
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +3
Query: 303 NFNLVMHLYKYXXXXXXXN*QSSNKIFFSVTY 398
N N + + Y Y N + NK+++++ Y
Sbjct: 84 NNNPLSNNYNYNNNYNNYNKHNYNKLYYNINY 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,578
Number of Sequences: 438
Number of extensions: 2302
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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