Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_H17
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0298 + 1998278-1998655,1998836-1999111,1999203-1999271,199... 32 0.26
07_03_0072 - 13051145-13052362 31 0.45
07_01_1186 + 11266210-11266517,11266608-11266656 31 0.60
07_03_1273 + 25369661-25369815,25369957-25370329,25371477-253715... 29 2.4
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 28 3.2
11_02_0038 - 7631462-7634428,7635975-7636250 28 4.2
01_01_0727 - 5675215-5675277,5675523-5675621,5676645-5676782,567... 28 4.2
09_06_0232 - 21737299-21739233 27 5.6
09_04_0506 - 18188785-18190599 27 5.6
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 27 5.6
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630... 27 5.6
03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187 27 5.6
02_05_0067 + 25557975-25558553 27 5.6
06_02_0103 - 11829343-11829699,11831560-11831826,11832239-118325... 27 7.3
06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148... 27 7.3
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 27 7.3
02_01_0060 - 434731-435879 27 7.3
01_01_0411 - 3096593-3097402 27 7.3
09_04_0296 + 16461482-16461544,16462087-16463097 27 9.7
07_03_1671 + 28512585-28513424 27 9.7
07_03_1490 - 26941322-26941417,26941850-26942377,26944590-269448... 27 9.7
07_03_1488 - 26925166-26925729,26927946-26928184,26929247-269296... 27 9.7
07_03_0156 - 14524757-14526403 27 9.7
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 27 9.7
03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,318... 27 9.7
01_01_0905 + 7116121-7116236,7116285-7116339,7116948-7117005,711... 27 9.7
>02_01_0298 +
1998278-1998655,1998836-1999111,1999203-1999271,
1999881-2000073,2000161-2000555
Length = 436
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -2
Query: 299 HPLRAALSSNPTLRRVPLAACLRRYGPGTLYGKTAPFKTNLDGRRDREKAEPPEHHISRR 120
HPL AA+++ R+ AC G GT + + DG + R++ E H+ RR
Sbjct: 18 HPLAAAIAAPHRRRKHDAVACRAAAGKGTSKARA----RDKDGSK-RQQRRALEEHLKRR 72
Query: 119 NRNG 108
R+G
Sbjct: 73 TRSG 76
>07_03_0072 - 13051145-13052362
Length = 405
Score = 31.1 bits (67), Expect = 0.45
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -1
Query: 360 PTVCLFA---IGLAVIFSLRWSLPPT*GCTLKQPDSEESPSRGLPPSLRAWHPLRENGPV 190
P+ CL A +GL+ + ++RWSLPP+ L+Q + E+ L + P R P
Sbjct: 132 PSPCLQAPQPVGLSPVTAVRWSLPPSLLAALQQSEPLETTREKLRATDDT--PSRAAVPT 189
Query: 189 QDELGRETRPRESGTSR 139
ETR R+ G R
Sbjct: 190 FVTPTLETRRRDQGRWR 206
>07_01_1186 + 11266210-11266517,11266608-11266656
Length = 118
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 206 RRGCQARSDGGRPREGLSSESGCLRVQP*VGGKLHLR 316
RRG +AR GGRP G +++ C R Q GG LR
Sbjct: 43 RRGAEARRGGGRPGRGRQAQAQC-RAQ--AGGSERLR 76
>07_03_1273 +
25369661-25369815,25369957-25370329,25371477-25371577,
25371749-25371785
Length = 221
Score = 28.7 bits (61), Expect = 2.4
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 305 VYHPLRAALSSNPTLRRVPLAACLRRYGPGTLYGK-TAPFKTNLDGRRDR 159
+YH RA LRR P AA RR G + + TA T DGR R
Sbjct: 93 LYHVARARTFFAGVLRRRPAAAADRRRSAGDVLAELTAAAATTSDGRVGR 142
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -1
Query: 159 RESGTSRTPHLPPQ*ERRDSVLGYIPVRSPLLRKS-WLVSFPPLTNMLKF 13
R S T R H PP R L P SPLL S + + P L L+F
Sbjct: 37 RASTTRRALHTPPHQRTRLPPLSVAPSASPLLNPSIHVAAAPSLGRSLRF 86
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 27.9 bits (59), Expect = 4.2
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +2
Query: 92 PSTESRRSYCGGRCGVREVPLSRGLVSRPSSS*TGPFSRRGCQ-----ARSDGGRPREGL 256
P RS CGG GVR L R RP SS SR + R+ PR GL
Sbjct: 22 PPAAGSRSSCGGVVGVRVPNLHRQRFPRPRSSAPWASSRSSIRILIIILRARSVSPRSGL 81
Query: 257 S 259
+
Sbjct: 82 N 82
>01_01_0727 -
5675215-5675277,5675523-5675621,5676645-5676782,
5676878-5676995,5678177-5678520
Length = 253
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 259 GESLSRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLP 140
G +RP ++++ AP + +PR+ R GD ++R P
Sbjct: 14 GGDAARPGTLSSLFAPRSSPKPRAPRPEPGDGPPQERRKP 53
>09_06_0232 - 21737299-21739233
Length = 644
Score = 27.5 bits (58), Expect = 5.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 110 RSYCGGRCGVREVPLSRGLVSRP--SSS*TGPFSRRGC 217
R+YC C +PL RG++ R + T PF + C
Sbjct: 83 RAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKAC 120
>09_04_0506 - 18188785-18190599
Length = 604
Score = 27.5 bits (58), Expect = 5.6
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -2
Query: 245 AACLRRYGPGTLYGKTAPFKTNLDG----RRDREK-AEPPEHHISRRNRN 111
AA ++YG G +GK P + G RR+REK PP RR+R+
Sbjct: 466 AASDQQYGEGGSHGKERPPEREWSGASDRRREREKDLPPPPDWPERRHRD 515
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 27.5 bits (58), Expect = 5.6
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 17 LSILVSGGKETNQDFLSSGERTGI*PSTESRRSYCGGRCGVREVPLSRGLVSR 175
+ +L++G T Q SS RTG+ S E+R G C V E + L+ R
Sbjct: 287 VGVLINGFISTGQTSHSSDMRTGVYLSPENRAFTSVGLCDVDEKGVQYMLLCR 339
>03_06_0341 -
33261210-33261327,33261411-33262057,33262950-33263061,
33263313-33264097,33264797-33264867,33266323-33266635
Length = 681
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 271 LLESAALSGW*TPSKAKYYRETDSEQAYGGKLKP 372
L + A+SG P A+ Y++ S AYG ++ P
Sbjct: 619 LAQQLAMSGGQNPQLAQQYKQMPSMSAYGMRMPP 652
>03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187
Length = 297
Score = 27.5 bits (58), Expect = 5.6
Identities = 32/105 (30%), Positives = 43/105 (40%)
Frame = +2
Query: 47 TNQDFLSSGERTGI*PSTESRRSYCGGRCGVREVPLSRGLVSRPSSS*TGPFSRRGCQAR 226
T + G RTG SRR GG CG+R R L +R + G GC+
Sbjct: 78 TRRTGAGGGRRTGA-----SRRRPSGGSCGLR-----RRLRARRKGTGGGGDCGGGCRRY 127
Query: 227 SDGGRPREGLSSESGCLRVQP*VGGKLHLRLNITARPIANKHTVG 361
G R+ +S G +GGK+ N +RP N H +G
Sbjct: 128 WVSGGGRDWMSGGGG----SGGLGGKVCKLANSQSRP-HNHHLMG 167
>02_05_0067 + 25557975-25558553
Length = 192
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 410 PFSSHL*QYTCSNGFSFPPYACS 342
P SH Q C G S+P YACS
Sbjct: 48 PSRSHSCQDCCKAGRSYPTYACS 70
>06_02_0103 -
11829343-11829699,11831560-11831826,11832239-11832559,
11833783-11833844,11835413-11835446,11835539-11835619
Length = 373
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 256 ESLSRPASVATGLAPSTGKRPR 191
E+L+RP +V TG+AP K+ R
Sbjct: 154 EALARPTAVITGMAPEDLKKSR 175
>06_01_0191 +
1478267-1478929,1480579-1480789,1482625-1482925,
1483217-1483612,1483993-1484070,1484166-1484373
Length = 618
Score = 27.1 bits (57), Expect = 7.3
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Frame = -1
Query: 261 EESPSRGLPPSLRAWH---PLRENGPVQDELGRETRPRESGTSRTPHLPPQ*ERRDSVL- 94
E++ G PPS R E+ P + + +PR R H PP ERR ++
Sbjct: 74 EDAAEAGAPPSRRVPACDAGYSEHTPCEGQRWSLRQPRRRFAYRERHCPPPAERRRCLVP 133
Query: 93 ---GY-IPVRSPLLR-KSWLVSFP 37
GY P+R P R +W + P
Sbjct: 134 APRGYRAPLRWPRSRDAAWYANAP 157
>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
Length = 1614
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 201 NGPVQDELGRETRPRESGTSRTPHLP 124
NGP DE G E PR + T +P
Sbjct: 1345 NGPTLDEAGTEHAPRSLSSKNTSSIP 1370
>02_01_0060 - 434731-435879
Length = 382
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 270 PDSEESPSRGLPPSLRAWHPLRENGP 193
PD E + GLPP +HP +GP
Sbjct: 47 PDDVEDAAGGLPPPAITFHPSSLSGP 72
>01_01_0411 - 3096593-3097402
Length = 269
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 247 SRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLPNTTSP---AAIGTAGFSAGL 89
S PA L+P+T K+ ++ T D P+ T+P AA TAG G+
Sbjct: 203 STPAPAPAPLSPATKKKGKTPATSVADAPEAADATPDATTPSLAAARVTAGAGVGV 258
>09_04_0296 + 16461482-16461544,16462087-16463097
Length = 357
Score = 26.6 bits (56), Expect = 9.7
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = -3
Query: 307 EFTTHLGLHSQATRL*GESLSRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLPNTTS 128
E TTH HSQ E + A+ A P++ + + +++ AR R T
Sbjct: 153 ESTTHRRRHSQPPPQQPEDVDAAAAAAAAAPPNSKPKKKKKKSRPCFPGARLRP-RGTVP 211
Query: 127 PAAIGTAGFSAGLYSCSLAA 68
P ++G S ++C + A
Sbjct: 212 PPPPSSSGPSPATFACVVKA 231
>07_03_1671 + 28512585-28513424
Length = 279
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 256 ESLSRPASVATGLAPSTGKRPRSRRTWTG 170
+SL+R ++ + PS R RSRR W G
Sbjct: 203 DSLARAEAMFREVTPSGRTRARSRRCWRG 231
>07_03_1490 -
26941322-26941417,26941850-26942377,26944590-26944828,
26945891-26946318,26946728-26946837
Length = 466
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 148 NLPNTTS-PAAIGTAGFSAGLYSCSLAATEEILVSFFSSAY 29
N P T P G + ++CS AT EIL+S S++
Sbjct: 312 NRPETICIPGDYGAVDITLSRFNCSAEATVEILISEVQSSF 352
>07_03_1488 -
26925166-26925729,26927946-26928184,26929247-26929674,
26930084-26930193
Length = 446
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 148 NLPNTTS-PAAIGTAGFSAGLYSCSLAATEEILVSFFSSAY 29
N P T P G + ++CS AT EIL+S S++
Sbjct: 312 NRPETICIPGDYGAVDITLSRFNCSAEATVEILISEVQSSF 352
>07_03_0156 - 14524757-14526403
Length = 548
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 156 LAVSSPVQVRLERGRFPVEGARPVATEAGRERDSPQSRVA*EC 284
+ + SP V+ GR V+ R + G+ERD + + EC
Sbjct: 436 ILIESPSNVQTRPGRHSVDVVRGDESRRGKERDYRRPAASSEC 478
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 169 DETARKRNLPNTTSPAAIGTAGFSAGLYSCSLAATEEILV 50
+ET L N T P+A+ T F L + + AA +E++V
Sbjct: 139 EETPDMAFLANITVPSALVTKQFGDALRAAASAADDEVVV 178
>03_01_0414 +
3183292-3183735,3184547-3184969,3185435-3185535,
3186178-3187439,3187625-3187665,3187777-3187845,
3187975-3188075,3188413-3188491,3188570-3188668,
3188757-3188825,3188918-3188967,3189211-3189387,
3189496-3189634
Length = 1017
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 230 RYGPGTLYGKTAPFKTNLDGRRDREKAEP 144
R GT++ + K N DG++D +K P
Sbjct: 657 RIPTGTVHNQAKEHKENFDGKQDNKKLHP 685
>01_01_0905 +
7116121-7116236,7116285-7116339,7116948-7117005,
7117637-7117731,7117823-7117926,7118310-7118438,
7118845-7120633,7120849-7121054,7121865-7121949,
7122183-7122422
Length = 958
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 261 EESPSRGLPPSLRAWHPLRENGPVQDELGRETRP 160
++SP +PPSL + + ++ P + GR+ P
Sbjct: 472 DQSPQMSVPPSLICSNAMTDDAPFDNRPGRKEMP 505
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,593,664
Number of Sequences: 37544
Number of extensions: 323458
Number of successful extensions: 1124
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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