Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_H17
         (462 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AL032657-9|CAA21736.1|  829|Caenorhabditis elegans Hypothetical ...    29   1.6  
AF043704-5|AAK21474.1|  128|Caenorhabditis elegans Hypothetical ...    28   3.7  
AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical ...    28   3.7  
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p...    27   4.9  
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr...    27   4.9  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    27   4.9  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    27   4.9  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    27   6.5  
AC024755-8|AAF59636.2|  604|Caenorhabditis elegans Hypothetical ...    27   6.5  

>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = -1

Query: 255 SPSRGLPPSLRAWHPLRENGPVQDELGRETR-PRESGTSRTPHLPPQ*ERRDS-VLGYIP 82
           SP R   P+     P R   P +    R  R P  S  SR+P  PP+  R+DS     + 
Sbjct: 477 SPRRRRSPAAA---PRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDSEQQAPVA 533

Query: 81  VRSPLLRK 58
           V+SP ++K
Sbjct: 534 VKSPEMKK 541


>AL032657-9|CAA21736.1|  829|Caenorhabditis elegans Hypothetical
           protein Y47H9C.9 protein.
          Length = 829

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 188 KTNLDGRRDREKAEPPEHHISRRN 117
           +T  D +RD  K   P HH++RRN
Sbjct: 412 RTPDDYKRDSSKPSKPSHHVARRN 435


>AF043704-5|AAK21474.1|  128|Caenorhabditis elegans Hypothetical
           protein W01B11.1 protein.
          Length = 128

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = -3

Query: 247 SRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLPNTTSPAAIGTAGFSAGLYSCSLAA 68
           S+  S +   +PS GK  + R   +G   +++ + P  +  A      FSA L   S+A 
Sbjct: 59  SKSKSKSKDSSPSNGKEKKKRTKRSGGSKSKESSEPPPSLSAFKWQMAFSAFLVFISVAI 118

Query: 67  TEEILV 50
           T  +L+
Sbjct: 119 TLMVLI 124


>AC006833-6|AAF60950.1|  491|Caenorhabditis elegans Hypothetical
           protein ZK616.1 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 324 IFSLRWSLPPT*GCTLKQPDSEESPS 247
           + S+ W+ P T G   K+P SEESP+
Sbjct: 159 LISVSWARPDTVGRKRKRPMSEESPT 184


>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = -1

Query: 264 SEESPSRGLPPSLRAWHPLRENGPVQDELGRETRPRESGTSRTPHLPPQ*ERR-DSVLGY 88
           S   PS   P S+ +   L+   P++DE  R       GTS T    PQ  +   S  GY
Sbjct: 59  SPPPPSNSPPESMAS---LQAESPIEDEDARHEMTSTEGTSSTGTGSPQEPKTWISQPGY 115

Query: 87  --IPVRSPLLRKSWLVSF 40
             +P+  PL R    + F
Sbjct: 116 HPVPISGPLPRHPQSILF 133


>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
 Frame = -1

Query: 264 SEESPSRGLPPSLRAWHPLRENGPVQDELGRETRPRESGTSRTPHLPPQ*ERR-DSVLGY 88
           S   PS   P S+ +   L+   P++DE  R       GTS T    PQ  +   S  GY
Sbjct: 59  SPPPPSNSPPESMAS---LQAESPIEDEDARHEMTSTEGTSSTGTGSPQEPKTWISQPGY 115

Query: 87  --IPVRSPLLRKSWLVSF 40
             +P+  PL R    + F
Sbjct: 116 HPVPISGPLPRHPQSILF 133


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
            protein R11G1.1 protein.
          Length = 1656

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 214  PSTGKRPRSRRTWTGDETARKRNLPNTTSPAAIGTA 107
            P T K+P SR++      + KR+   +TS + +G+A
Sbjct: 1226 PQTPKKPESRKSSAKSSASSKRSKIPSTSQSRVGSA 1261


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 270  PDSEESPSRGLPPSLRAWHPLRENGP 193
            P    SP RG+PP +R   P    GP
Sbjct: 1471 PRGMNSPMRGMPPPMRGGGPPMRGGP 1496


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 20/49 (40%), Positives = 22/49 (44%)
 Frame = -3

Query: 274 ATRL*GESLSRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLPNTTS 128
           A  L GE+L  P S AT     T  R  SRR+ T   TA  R     TS
Sbjct: 228 AATLKGEALLPPDSPATERTTMTVSRHYSRRSTTTTTTATPRRGDKKTS 276


>AC024755-8|AAF59636.2|  604|Caenorhabditis elegans Hypothetical
           protein Y34B4A.8 protein.
          Length = 604

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -1

Query: 321 FSLRWSLPPT*GCTLKQPDSEESPSRGLPPSLR-AWHPLRENGPVQDELGRETRPRESGT 145
           FS   S  P  G +L +  +E  P+R  PPS R A     ++ P+   +    RP ES +
Sbjct: 483 FSDDQSPSPFNGGSLTRSHTEHRPNRPPPPSFRAACADTPKSRPISYNIAVGARPNESHS 542

Query: 144 SRTP 133
              P
Sbjct: 543 VSQP 546


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,670,776
Number of Sequences: 27780
Number of extensions: 234808
Number of successful extensions: 667
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)