Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_H12
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81461-2|CAB03835.1| 135|Caenorhabditis elegans Hypothetical pr... 104 5e-23
U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like... 36 0.014
AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3 ... 36 0.014
X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein ( Caeno... 31 0.40
U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical pr... 31 0.40
AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical ... 31 0.40
AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical ... 31 0.40
AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical ... 31 0.40
AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical ... 31 0.40
Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical p... 31 0.69
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 30 0.92
U00068-1|AAA50745.1| 85|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 29 2.8
Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical pr... 28 3.7
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 28 4.9
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical ... 28 4.9
AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical... 27 6.5
Z92782-10|CAE17812.1| 377|Caenorhabditis elegans Hypothetical p... 27 8.6
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 27 8.6
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z81461-2|CAB03835.1| 135|Caenorhabditis elegans Hypothetical
protein C04F12.4 protein.
Length = 135
Score = 104 bits (249), Expect = 5e-23
Identities = 54/131 (41%), Positives = 78/131 (59%)
Frame = +3
Query: 15 MPFARYVEPGRVALVSDGPLKGKLVGVVDIIDQTRALIDGPGSGVSRQQIRLNQLHLTKF 194
M F R V+ GRV ++ G +GKL +V++ID R IDGP S V+R L L LTKF
Sbjct: 1 MVFNRVVQIGRVVFIASGKDQGKLAAIVNVIDGNRVQIDGPSSDVTRTVRNLKDLQLTKF 60
Query: 195 RLKYPFTAPTRVVRKAWTDAQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRN 374
LK T+ V+ A+ A++ E + K+QWA+K+A + RA++TD++R+KL A+ RN
Sbjct: 61 VLKLRVGQRTKGVKAAFDAAKVTENFQKTQWAKKIAQRAIRAKLTDFERYKLMKAKQMRN 120
Query: 375 RARTAVFKSLK 407
R LK
Sbjct: 121 RIVRVELAKLK 131
>U41549-2|AAA83282.1| 208|Caenorhabditis elegans Histone h1 like
protein 3 protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.014
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +3
Query: 252 AQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRNRARTAVFKSLKVKAARAGV 431
A EK AK AQK A EK+A+ T + K T+ +VK+ ++ + K K A++
Sbjct: 127 AATGEKKAKKPVAQKAATGEKKAKKTTATKTKKTADKVKKVKSPKKIAKPTAKKVAKSP- 185
Query: 432 FGKSKIPKSA 461
K PK A
Sbjct: 186 -AKKSAPKKA 194
>AF012253-1|AAB66471.1| 208|Caenorhabditis elegans histone H1.3
protein.
Length = 208
Score = 36.3 bits (80), Expect = 0.014
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +3
Query: 252 AQLNEKWAKSQWAQKLANKEKRAQMTDYDRFKLTSARVKRNRARTAVFKSLKVKAARAGV 431
A EK AK AQK A EK+A+ T + K T+ +VK+ ++ + K K A++
Sbjct: 127 AATGEKKAKKPVAQKAATGEKKAKKTTATKTKKTADKVKKVKSPKKIAKPTAKKVAKSP- 185
Query: 432 FGKSKIPKSA 461
K PK A
Sbjct: 186 -AKKSAPKKA 194
>X01005-1|CAA25498.1| 273|Caenorhabditis elegans protein (
Caenorhabditis eleganstransposable element Tc1. ).
Length = 273
Score = 31.5 bits (68), Expect = 0.40
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 PGSGVSRQQIRLNQLHLTKFRLKYPFTAP-TRVVRKAWTDAQLNEKWAKSQWAQKLANKE 311
P R++++ LH K +K PF + R+ R AW A L +W + +WA+ + + E
Sbjct: 32 PSKRTVRRRLQQAGLHGRK-PVKKPFISKKNRMARVAWAKAHL--RWGRQEWAKHIWSDE 88
Query: 312 KRAQMTDYD 338
+ + D
Sbjct: 89 SKFNLFGSD 97
>U39743-1|AAA80436.2| 314|Caenorhabditis elegans Hypothetical
protein R173.2 protein.
Length = 314
Score = 31.5 bits (68), Expect = 0.40
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 PGSGVSRQQIRLNQLHLTKFRLKYPFTAP-TRVVRKAWTDAQLNEKWAKSQWAQKLANKE 311
P R++++ LH K +K PF + R+ R AW A L +W + +WA+ + + E
Sbjct: 73 PSKRTVRRRLQQAGLHGRK-PVKKPFISKKNRMARVAWAKAHL--RWGRQEWAKHIWSDE 129
Query: 312 KRAQMTDYD 338
+ + D
Sbjct: 130 SKFNLFGSD 138
>AF125450-4|AAD12818.1| 343|Caenorhabditis elegans Hypothetical
protein Y39F10A.4 protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.40
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 PGSGVSRQQIRLNQLHLTKFRLKYPFTAP-TRVVRKAWTDAQLNEKWAKSQWAQKLANKE 311
P R++++ LH K +K PF + R+ R AW A L +W + +WA+ + + E
Sbjct: 102 PSKRTVRRRLQQAGLHGRK-PVKKPFISKKNRMARVAWAKAHL--RWGRQEWAKHIWSDE 158
Query: 312 KRAQMTDYD 338
+ + D
Sbjct: 159 SKFNLFGSD 167
>AF067947-2|AAC19229.2| 273|Caenorhabditis elegans Hypothetical
protein T10B5.9 protein.
Length = 273
Score = 31.5 bits (68), Expect = 0.40
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 PGSGVSRQQIRLNQLHLTKFRLKYPFTAP-TRVVRKAWTDAQLNEKWAKSQWAQKLANKE 311
P R++++ LH K +K PF + R+ R AW A L +W + +WA+ + + E
Sbjct: 32 PSKRTVRRRLQQAGLHGRK-PVKKPFISKKNRMARVAWAKAHL--RWGRQEWAKHIWSDE 88
Query: 312 KRAQMTDYD 338
+ + D
Sbjct: 89 SKFNLFGSD 97
>AF067947-1|AAC19233.1| 273|Caenorhabditis elegans Hypothetical
protein T10B5.1 protein.
Length = 273
Score = 31.5 bits (68), Expect = 0.40
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 PGSGVSRQQIRLNQLHLTKFRLKYPFTAP-TRVVRKAWTDAQLNEKWAKSQWAQKLANKE 311
P R++++ LH K +K PF + R+ R AW A L +W + +WA+ + + E
Sbjct: 32 PSKRTVRRRLQQAGLHGRK-PVKKPFISKKNRMARVAWAKAHL--RWGRQEWAKHIWSDE 88
Query: 312 KRAQMTDYD 338
+ + D
Sbjct: 89 SKFNLFGSD 97
>AF016682-7|AAB66191.2| 343|Caenorhabditis elegans Hypothetical
protein T07D3.8 protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.40
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 135 PGSGVSRQQIRLNQLHLTKFRLKYPFTAP-TRVVRKAWTDAQLNEKWAKSQWAQKLANKE 311
P R++++ LH K +K PF + R+ R AW A L +W + +WA+ + + E
Sbjct: 102 PSKRTVRRRLQQAGLHGRK-PVKKPFISKKNRMARVAWAKAHL--RWGRQEWAKHIWSDE 158
Query: 312 KRAQMTDYD 338
+ + D
Sbjct: 159 SKFNLFGSD 167
>Z98866-16|CAB11565.2| 1159|Caenorhabditis elegans Hypothetical
protein Y49E10.19 protein.
Length = 1159
Score = 30.7 bits (66), Expect = 0.69
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 276 KSQWAQKLANKEKRAQMTDYDRFKLTSARVKRNRARTAVFKSLKVKAAR 422
++QWA ++ RA +T+YDR K R+ T L V AR
Sbjct: 807 EAQWAMLRHVEKHRALLTEYDRLKRDGPRIIDGPRGTITVSQLSVNMAR 855
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 30.3 bits (65), Expect = 0.92
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -1
Query: 136 GPSISARV*---SMISTTPTNFPFRGPSETRATRPGS 35
GPS S+ V SMI+TTP PF P+ + PGS
Sbjct: 374 GPSTSSHVTPQMSMINTTPQQPPFSHPNSQQQATPGS 410
>U00068-1|AAA50745.1| 85|Caenorhabditis elegans Hypothetical
protein W04D12.1 protein.
Length = 85
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 261 NEKWAKSQWAQKLANKEKRAQMTDYDRFK 347
N KW + A K+A KEK+ +M D ++ K
Sbjct: 43 NRKWKRIDSAVKVAKKEKKKKMKDEEKKK 71
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 439 KVKSPKAQLKSYARRNPTAKNQQRSNS 519
+V SP AQ SYARRN ++ +S S
Sbjct: 1260 RVNSPPAQSTSYARRNDGKRHPSKSRS 1286
>Z66567-2|CAA91488.1| 1118|Caenorhabditis elegans Hypothetical
protein ZK455.2 protein.
Length = 1118
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 185 NKIP-PKIPFYSTHTCCQKSVDRR 253
N+ P P P+YST T C K+V RR
Sbjct: 53 NRSPSPHEPYYSTRTRCSKNVRRR 76
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 108 DQTRALI-DGPGSGVSRQQIRLNQLHLTKFRLKYPFTAPTRVVRKAWTDAQLNEKWAKSQ 284
DQ A++ +G G + R ++ +K +LK TAP V + WT + A S
Sbjct: 1033 DQAAAMMNEGKGQKIKNMLRRNSRRDKSKSKLKIESTAPAAVNPRGWTQPTPSNTSAASV 1092
Query: 285 WAQKLANKEKR 317
+ N ++R
Sbjct: 1093 ESAFCGNYQER 1103
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical protein
C04D8.1 protein.
Length = 1317
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 108 DQTRALI-DGPGSGVSRQQIRLNQLHLTKFRLKYPFTAPTRVVRKAWTDAQLNEKWAKSQ 284
DQ A++ +G G + R ++ +K +LK TAP V + WT + A S
Sbjct: 911 DQAAAMMNEGKGQKIKNMLRRNSRRDKSKSKLKIESTAPAAVNPRGWTQPTPSNTSAASV 970
Query: 285 WAQKLANKEKR 317
+ N ++R
Sbjct: 971 ESAFCGNYQER 981
>AF125971-2|AAN73291.1| 458|Caenorhabditis elegans Hypothetical
protein Y4C6B.4a protein.
Length = 458
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 534 AFWHKRITSLLVFCCWV 484
+F+ T LL+FCCWV
Sbjct: 184 SFYFHSATCLLIFCCWV 200
>AL110500-19|CAB60433.2| 468|Caenorhabditis elegans Hypothetical
protein Y87G2A.13 protein.
Length = 468
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/87 (25%), Positives = 40/87 (45%)
Frame = -1
Query: 328 VICALFSLFANFCAHWLLAHFSFS*ASVHAFLTTRVGAVKGYFRRNFVKWSWLRRICCRE 149
+I + S F +H L AH + + V A + G VK Y + + + + R +CC
Sbjct: 318 IIGWVLSKFLTRVSH-LQAHLNLAYDKV-AEMRAEAGKVKNYTIQAMI-YRYYRYLCCAA 374
Query: 148 TPLPGPSISARV*SMISTTPTNFPFRG 68
GP++ A + +++ T N + G
Sbjct: 375 LQYFGPAVLALLFALLLKTTGNLSWIG 401
>Z92782-10|CAE17812.1| 377|Caenorhabditis elegans Hypothetical
protein F14F8.10 protein.
Length = 377
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = -3
Query: 536 LLSGTKELLLCWFFAVGFLRA--*LFNC 459
+L+GT L+C+FF+ + RA LF+C
Sbjct: 332 ILNGTSHFLMCYFFSSQYKRATRELFSC 359
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 430 SSAKVKSPKAQLKSYARRNPTAKNQQRSNSFVP 528
SS KSP+ +K+Y R+ KN + S +P
Sbjct: 45 SSEDEKSPEDVIKAYKRKIENQKNVENEESVIP 77
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 27.1 bits (57), Expect = 8.6
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 293 EISKQREESTDDRLRQIQADVGPC*EESCKNSSV*KLEGESGARWCLRQK*NPQKRS*KA 472
E K+REE +DR ++ + ++ S +SS ES ++K K+S K
Sbjct: 246 ENEKKREELKEDRRKEKKREMRAVRNVSEDDSSTSSESEESDFEQKKKKKVKKSKKSKKD 305
Query: 473 THEETQQQKTSKE 511
+E +++K SK+
Sbjct: 306 KKKEKKEKKKSKK 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,633,052
Number of Sequences: 27780
Number of extensions: 226114
Number of successful extensions: 686
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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