Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_H01
         (254 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr...    27   1.8  
U80842-5|AAK71419.2|  305|Caenorhabditis elegans Serpentine rece...    27   1.8  
U00044-7|AAA50675.1|  990|Caenorhabditis elegans Hypothetical pr...    27   1.8  
Z68879-6|CAA93086.1|  207|Caenorhabditis elegans Hypothetical pr...    25   5.6  
AF010239-1|AAB65417.1|  207|Caenorhabditis elegans glutathione S...    25   5.6  
AF045638-5|AAC02562.3|  544|Caenorhabditis elegans Hypothetical ...    25   7.4  
AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical ...    25   9.8  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    22   10.0 

>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 215 PFPREDLIYQKPSWQHVP 162
           P P     YQ PSW H P
Sbjct: 839 PMPPSSTFYQTPSWDHKP 856


>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
           protein T01G1.3 protein.
          Length = 1083

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -1

Query: 215 PFPREDLIYQKPSWQHVP 162
           P P     YQ PSW H P
Sbjct: 839 PMPPSSTFYQTPSWDHKP 856


>U80842-5|AAK71419.2|  305|Caenorhabditis elegans Serpentine
           receptor, class i protein50 protein.
          Length = 305

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = +2

Query: 74  TQTINYY----FIRFKLFIHIMALKLYKIDASPPARAAMMAFDILN 199
           T  INYY     I   + IH M L ++K D     +  M+AF I+N
Sbjct: 9   TWLINYYNVVGLISLLINIHTMLLIIFKSDKLGNFKYFMLAFQIIN 54


>U00044-7|AAA50675.1|  990|Caenorhabditis elegans Hypothetical
           protein K04C2.2 protein.
          Length = 990

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = +2

Query: 107 KLFIHIMALKLYKIDASPPARAAMMAFDILNLPVEMVDVNLLEKEHLK 250
           K+ + +  LK  K+DA    + A    +++N+ V+M   ++ EK+ L+
Sbjct: 717 KIKLVVPLLKWAKVDAKTHDKVAQKVLELVNIVVKMKFTDVSEKDALQ 764


>Z68879-6|CAA93086.1|  207|Caenorhabditis elegans Hypothetical
           protein K08F4.7 protein.
          Length = 207

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 134 KLYKIDASPPARAAMMAFDILNLPVEMVDVNLLEKEHLKP 253
           KL   DA   A    + F +LN+P E   V++ E   LKP
Sbjct: 5   KLLYFDARALAEPIRIMFAMLNVPYEDYRVSVEEWSKLKP 44


>AF010239-1|AAB65417.1|  207|Caenorhabditis elegans glutathione
           S-transferase protein.
          Length = 207

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 134 KLYKIDASPPARAAMMAFDILNLPVEMVDVNLLEKEHLKP 253
           KL   DA   A    + F +LN+P E   V++ E   LKP
Sbjct: 5   KLLYFDARALAEPIRIMFAMLNVPYEDYRVSVEEWSKLKP 44


>AF045638-5|AAC02562.3|  544|Caenorhabditis elegans Hypothetical
           protein C35B1.2a protein.
          Length = 544

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 176 WQHVPGGWHRFYKVLMP 126
           WQ  P G HRF+++L P
Sbjct: 350 WQR-PSGSHRFFRILYP 365


>AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical
           protein K10F12.4a protein.
          Length = 309

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 134 KLYKIDASPPARAAMMAFDILNLPVEMVDVN 226
           +LY +   P A+  ++     N+PVE+V+VN
Sbjct: 100 RLYSMRFCPYAQRVLIYLAKKNIPVEVVNVN 130


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
            K08E7.5a protein.
          Length = 1221

 Score = 21.8 bits (44), Expect(2) = 10.0
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 151  CQPPGTCCHDGF 186
            C PP TCC   F
Sbjct: 1004 CLPPPTCCSINF 1015



 Score = 21.0 bits (42), Expect(2) = 10.0
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +1

Query: 145 NRCQPPGTCC 174
           N C PP  CC
Sbjct: 969 NCCAPPAPCC 978


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,453,116
Number of Sequences: 27780
Number of extensions: 96001
Number of successful extensions: 158
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)