Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_H01
         (254 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   2.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   2.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   4.1  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           20   5.5  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           20   5.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   9.6  

>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 209 PREDLIYQKPSWQHVPG 159
           P + L Y+ P W HV G
Sbjct: 516 PVKYLTYEYPWWSHVLG 532


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 209 PREDLIYQKPSWQHVPG 159
           P + L Y+ P W HV G
Sbjct: 569 PVKYLTYEYPWWSHVLG 585


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +2

Query: 137 LYKIDASPPARAAMMAFDILNLPVEMVDVNLLEKEHL 247
           +YK D     R      + +N     +  NLLEK  L
Sbjct: 403 IYKYDVRDGCRTPFQWDNSINAGFSKIAENLLEKNWL 439


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 221 HQPFPREDLIYQKPS 177
           H+P   +DL+Y +PS
Sbjct: 69  HKPPGPKDLVYLEPS 83


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 221 HQPFPREDLIYQKPS 177
           H+P   +DL+Y +PS
Sbjct: 70  HKPPGPKDLVYLEPS 84


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 71  CTQTINYYF 97
           C Q INY+F
Sbjct: 222 CDQRINYHF 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,284
Number of Sequences: 438
Number of extensions: 1339
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4511484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)