Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_G23
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.19
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.19
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.19
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.45
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.45
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.45
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.4
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 23 2.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.2
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.5
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 7.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 7.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 7.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 7.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 7.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 7.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 7.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 7.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 7.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 7.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 7.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 7.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 7.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 7.3
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.6
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.19
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = -2
Query: 365 EAGVEIDRGVRTLEEVQLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYIS 186
++G ++ GV L + + + V T+ +V S F I++ SV + +
Sbjct: 221 DSGEKLTLGVTILLSLTVFLNLVAETLPQV--SDAIPLLGSYFNCIMFMVASSVVLTVLV 278
Query: 185 DIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
I+H + + + SW+ + LP + RPG ++T
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 320
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.19
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = -2
Query: 365 EAGVEIDRGVRTLEEVQLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYIS 186
++G ++ GV L + + + V T+ +V S F I++ SV + +
Sbjct: 221 DSGEKLTLGVTILLSLTVFLNLVAETLPQV--SDAIPLLGSYFNCIMFMVASSVVLTVLV 278
Query: 185 DIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
I+H + + + SW+ + LP + RPG ++T
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 320
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.19
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = -2
Query: 365 EAGVEIDRGVRTLEEVQLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYIS 186
++G ++ GV L + + + V T+ +V S F I++ SV + +
Sbjct: 221 DSGEKLTLGVTILLSLTVFLNLVAETLPQV--SDAIPLLGSYFNCIMFMVASSVVLTVLV 278
Query: 185 DIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
I+H + + + SW+ + LP + RPG ++T
Sbjct: 279 LIFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 320
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -2
Query: 239 FEHIVYSATDSVEVGYISDIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
F I++ SV + + I+H + + + SW+ + LP + RPG ++T
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 320
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -2
Query: 239 FEHIVYSATDSVEVGYISDIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
F I++ SV + + I+H + + + SW+ + LP + RPG ++T
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 320
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.45
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -2
Query: 239 FEHIVYSATDSVEVGYISDIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
F I++ SV + + I+H + + + SW+ + LP + RPG ++T
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 320
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.8 bits (49), Expect = 1.4
Identities = 21/102 (20%), Positives = 43/102 (42%)
Frame = -2
Query: 365 EAGVEIDRGVRTLEEVQLSVQGVIVTIDEVRVSGGR*CTNLIFEHIVYSATDSVEVGYIS 186
++G ++ GV L + + + V T+ +V S F I++ SV + +
Sbjct: 289 DSGEKLTLGVTILLSLTVFLNLVAETLPQV--SDAIPLLGSYFNCIMFMVASSVVLTVLV 346
Query: 185 DIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
+H + + + SW+ + LP + RPG ++T
Sbjct: 347 LNFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 388
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 10 GAATAGVALDNVNGTE*VSRIHTSPGRRQVTAAGKVNLFHNDNHDITAKASPPEI--CQ 180
G ++G + NG+ + +R++ GK+ + H +N + A PP++ CQ
Sbjct: 1065 GITSSGSDSGSSNGSWTAGTVSQQKQKRRMVKYGKLVMIHEENAPL-PPALPPQVVSCQ 1122
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -3
Query: 121 DSLCRQLSPVSDPGMCVSV-RLTPCRLHY 38
D L + SP+SDP + + ++ C Y
Sbjct: 98 DQLLAECSPISDPNALIKISKILECFFKY 126
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 2.4
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +1
Query: 160 SPPEICQISLMYPTSTLSVAE*TICSKIRLVHQRPPLTRTSSIVTITPWTES 315
S P CQ P + +++ + S+ LV RPP I T +T++
Sbjct: 1168 SAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQPNGVITQYTVYTKA 1219
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.2
Identities = 13/60 (21%), Positives = 26/60 (43%)
Frame = -2
Query: 239 FEHIVYSATDSVEVGYISDIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRET 60
F I++ SV + + +H + + + SW+ + LP + RPG ++T
Sbjct: 329 FNCIMFMVASSVVLTVLVLNFHHRTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKT 388
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 5.5
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 317 DRRGRGRSREHRIIPSHYIEQIPAPVYYGNFPPRPIMVR 355
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 69 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 69 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 69 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 69 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 69 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 69 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 69 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 107
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 318 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 318 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 318 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 318 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 318 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 318 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 302 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 340
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = +2
Query: 260 DRRSHGLHQS*RLLPGRKAEPLQES*HLGRFQRRLQEVR 376
DRR G + R++P E + + G F R VR
Sbjct: 318 DRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRPIMVR 356
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 264 AAHTDFINRNDYSLDGKLNLF 326
A ++ + +DY+L+ KLN F
Sbjct: 203 ANYSGWYLNHDYNLENKLNYF 223
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 9.6
Identities = 13/59 (22%), Positives = 23/59 (38%)
Frame = -2
Query: 239 FEHIVYSATDSVEVGYISDIWHISGGEAFAVMSWLSLWKRFTLPAAVTCLRPGDVCIRE 63
F I++ SV + +H + + W+ + + LP + RP D RE
Sbjct: 298 FNCIMFMVASSVVSTILILNYHHRNADTHEMSEWVKVVFLYWLPCILRMSRPSDKEERE 356
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,825
Number of Sequences: 438
Number of extensions: 3450
Number of successful extensions: 30
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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