Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_G21
(585 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106583-3|AAD03134.1| 205|Caenorhabditis elegans Hypothetical ... 173 8e-44
AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL032657-11|CAA21737.3| 372|Caenorhabditis elegans Hypothetical... 30 1.1
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 28 4.2
AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical... 28 5.6
AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical ... 28 5.6
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical... 27 9.8
>AF106583-3|AAD03134.1| 205|Caenorhabditis elegans Hypothetical
protein F23C8.6 protein.
Length = 205
Score = 173 bits (421), Expect = 8e-44
Identities = 84/159 (52%), Positives = 111/159 (69%)
Frame = +2
Query: 107 LGNEMSSSAMEKHLFNLKFAVKELERNSXXXXXXXXXXXXXXXXXXXXGNMEGARIHAEN 286
+G SS A+EKHLF+LKFA K+LE+N+ GN E A++HAEN
Sbjct: 1 MGAGESSMALEKHLFDLKFAAKQLEKNAQRCEKDEKVEKDKLTAAIKKGNKEVAQVHAEN 60
Query: 287 AIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTL 466
AIR+KN+A+NY++M+AR+DAV++RVQTA T ++VT SM+GVVKAM++AMKSMNLEK+ L
Sbjct: 61 AIRKKNEAVNYIKMAARIDAVAARVQTAATQKRVTASMSGVVKAMESAMKSMNLEKVQQL 120
Query: 467 MDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDQLL 583
MD+FE FEDLDV + ME M TT P+ VD L+
Sbjct: 121 MDRFERDFEDLDVTTKTMEKTMDGTTVLNAPKSQVDALI 159
>AL110485-7|CAB60355.1| 237|Caenorhabditis elegans Hypothetical
protein Y46G5A.12 protein.
Length = 237
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/143 (24%), Positives = 68/143 (47%)
Frame = +2
Query: 155 LKFAVKELERNSXXXXXXXXXXXXXXXXXXXXGNMEGARIHAENAIRQKNQALNYLRMSA 334
L A++EL+R M+ ++ A++ +R + ++ M A
Sbjct: 22 LNKAIRELDRERARMEAQEKKVIADIKNMAKKNQMDSVKVMAKDLVRTRRYIKKFIVMKA 81
Query: 335 RVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAMKSMNLEKISTLMDKFESQFEDLDVQSS 514
+ AVS +VQT + + ++M GV KAM + + +NL +I +M +FE Q E +D++
Sbjct: 82 NIQAVSLKVQTLKSQDAMASAMKGVTKAMQSMNRQLNLPQIQKIMMEFEKQSEIMDMKEE 141
Query: 515 YMENAMSQTTTTTVPQGDVDQLL 583
M +A+ + + DQ++
Sbjct: 142 VMGDAIDDALGDAGDEEETDQIV 164
>Z81029-3|CAB02699.2| 207|Caenorhabditis elegans Hypothetical
protein C01A2.4 protein.
Length = 207
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/109 (25%), Positives = 51/109 (46%)
Frame = +2
Query: 251 GNMEGARIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAA 430
G+ + AR A+ ++ +NQ + MSAR+ V ++ + K+ ++M VK M A
Sbjct: 52 GHNDAARHLAKQLVQLRNQKTKSIGMSARISGVQAQNSHMQSMAKMGSAMGTTVKTMKAM 111
Query: 431 MKSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVDQ 577
M LEK++ M +F+ E + + M + + GD D+
Sbjct: 112 NAQMPLEKVAANMREFQMAQEKMGLTEEMMNDTLDSILDA---PGDADE 157
>AL032657-11|CAA21737.3| 372|Caenorhabditis elegans Hypothetical
protein Y47H9C.11 protein.
Length = 372
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 440 MNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTT 553
+ L +L KF ED D +SY+ENAM Q T T
Sbjct: 156 LKLNNQESLQQKFRKSDEDED-SNSYLENAMDQLETIT 192
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 449 EKISTLMDKFESQFEDLDVQSSYMENAM 532
EK+++L+D FE+ F L S ENA+
Sbjct: 305 EKVASLLDTFETLFNQLGELSKISENAL 332
>AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical
protein Y113G7B.18 protein.
Length = 728
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 427 SNEINESGENIYINGQV*ESV*GFGCTVFI 516
+ EI E G+ IY+N + E + GF CT FI
Sbjct: 447 TGEIKEEGD-IYLNRVLREMIIGFECTKFI 475
>AF003390-5|AAB54270.2| 873|Caenorhabditis elegans Hypothetical
protein R155.4 protein.
Length = 873
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 392 NSMAGVVKAMDAAMKSMNLEKISTLMDKFESQFEDLDVQS 511
+S+A VK A + + + L+DKF SQ+ LD++S
Sbjct: 156 SSIADKVKGFKGAYVVPDGDPYTNLLDKFVSQYVTLDIES 195
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.1 bits (57), Expect = 9.8
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +2
Query: 254 NMEGARIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAM 433
N EGA I AE N AL LR+ R + ++ AL + N+ ++ +DA+
Sbjct: 419 NCEGAIILAECIA--DNIAL--LRVDIRDNPIALAGLLALHSAMKMNTSITLLN-IDASC 473
Query: 434 KSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVD 574
++ EK+ D+FE F ++ ++ + + T T + D
Sbjct: 474 VKLSSEKVREYQDEFERYFREIQTYCDRNKDDVLKRLTVTFDDEEGD 520
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 27.1 bits (57), Expect = 9.8
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +2
Query: 254 NMEGARIHAENAIRQKNQALNYLRMSARVDAVSSRVQTALTTRKVTNSMAGVVKAMDAAM 433
N EGA I AE N AL LR+ R + ++ AL + N+ ++ +DA+
Sbjct: 419 NCEGAIILAECIA--DNIAL--LRVDIRDNPIALAGLLALHSAMKMNTSITLLN-IDASC 473
Query: 434 KSMNLEKISTLMDKFESQFEDLDVQSSYMENAMSQTTTTTVPQGDVD 574
++ EK+ D+FE F ++ ++ + + T T + D
Sbjct: 474 VKLSSEKVREYQDEFERYFREIQTYCDRNKDDVLKRLTVTFDDEEGD 520
>Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical
protein F40F8.11 protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 436 INESGENIYINGQV*ESV*GFGCTV 510
+ ESG+NI ++ +S+ G GCT+
Sbjct: 348 LKESGDNILVHAFARDSIYGTGCTI 372
>AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical
protein T15B7.1 protein.
Length = 307
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 576 WSTSPCGTVVVVVCDIAFSMYEDC 505
WST PC + C+I +M +DC
Sbjct: 59 WSTQPCTATSCIACEIKGAM-QDC 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,920,943
Number of Sequences: 27780
Number of extensions: 209188
Number of successful extensions: 623
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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