Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G20
         (350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ217943-1|ABB70740.1| 1095|Homo sapiens ADAM metallopeptidase w...    29   5.5  
BC008596-1|AAH08596.1|  336|Homo sapiens TMEM19 protein protein.       29   5.5  
AK223148-1|BAD96868.1|  336|Homo sapiens transmembrane protein 1...    29   5.5  
AK131344-1|BAD18500.1|  502|Homo sapiens protein ( Homo sapiens ...    29   5.5  
AK001798-1|BAA91918.1|  298|Homo sapiens protein ( Homo sapiens ...    29   5.5  
AJ315735-1|CAC86016.1| 1095|Homo sapiens metalloprotease disinte...    29   5.5  
X63547-2|CAA45111.1| 1089|Homo sapiens oncogene protein.               28   9.5  
X63546-2|CAA45109.1|  586|Homo sapiens oncogene protein.               28   9.5  
AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific prot...    28   9.5  

>DQ217943-1|ABB70740.1| 1095|Homo sapiens ADAM metallopeptidase with
           thrombospondin type 1 motif 17 protein.
          Length = 1095

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +1

Query: 187 PFGTELKPIGHCYRITCGGSMIDYAS---CGVVATNDEHCHVTEID 315
           P+ T+L   G C +I C G +   A    CGV + + + CH+ + D
Sbjct: 660 PYETDLCVHGKCQKIGCDGIIGSAAKEDRCGVCSGDGKTCHLVKGD 705


>BC008596-1|AAH08596.1|  336|Homo sapiens TMEM19 protein protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = +1

Query: 43  IKMVSKILIISMIVCTVNAAVWI 111
           IKM++ I+I+S+I+C ++ A WI
Sbjct: 13  IKMITNIVILSLIIC-ISLAFWI 34


>AK223148-1|BAD96868.1|  336|Homo sapiens transmembrane protein 19
           variant protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = +1

Query: 43  IKMVSKILIISMIVCTVNAAVWI 111
           IKM++ I+I+S+I+C ++ A WI
Sbjct: 13  IKMITNIVILSLIIC-ISLAFWI 34


>AK131344-1|BAD18500.1|  502|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16363 fis, clone THYMU2031139, weakly  similar
           to Homo sapiens zinc metalloprotease ADAMTS7 (ADAMTS7)
           mRNA. ).
          Length = 502

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +1

Query: 187 PFGTELKPIGHCYRITCGGSMIDYAS---CGVVATNDEHCHVTEID 315
           P+ T+L   G C +I C G +   A    CGV + + + CH+ + D
Sbjct: 417 PYETDLCVHGKCQKIGCDGIIGSAAKEDRCGVCSGDGKTCHLAKGD 462


>AK001798-1|BAA91918.1|  298|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10936 fis, clone OVARC1000959, weakly similar to
           HYPOTHETICAL PROTEIN MJ0933. ).
          Length = 298

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = +1

Query: 43  IKMVSKILIISMIVCTVNAAVWI 111
           IKM++ I+I+S+I+C ++ A WI
Sbjct: 13  IKMITNIVILSLIIC-ISLAFWI 34


>AJ315735-1|CAC86016.1| 1095|Homo sapiens metalloprotease
           disintegrin 17, with thrombospondin domains protein.
          Length = 1095

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +1

Query: 187 PFGTELKPIGHCYRITCGGSMIDYAS---CGVVATNDEHCHVTEID 315
           P+ T+L   G C +I C G +   A    CGV + + + CH+ + D
Sbjct: 660 PYETDLCVHGKCQKIGCDGIIGSAAKEDRCGVCSGDGKTCHLVKGD 705


>X63547-2|CAA45111.1| 1089|Homo sapiens oncogene protein.
          Length = 1089

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
 Frame = +1

Query: 196  TELKPIGHCYRITC------GGSMIDYA---SCGVVATNDEHC---HVTEIDPKKPY 330
            T +KPI + Y I+C      GG  I YA   +C     ND  C   H  EID    Y
Sbjct: 989  THIKPIYNLYAISCHSGILSGGHYITYAKNPNCKWYCYNDSSCEELHPDEIDTDSAY 1045


>X63546-2|CAA45109.1|  586|Homo sapiens oncogene protein.
          Length = 586

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
 Frame = +1

Query: 196 TELKPIGHCYRITC------GGSMIDYA---SCGVVATNDEHC---HVTEIDPKKPY 330
           T +KPI + Y I+C      GG  I YA   +C     ND  C   H  EID    Y
Sbjct: 486 THIKPIYNLYAISCHSGILSGGHYITYAKNPNCKWYCYNDSSCEELHPDEIDTDSAY 542


>AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific protease
            USP6 protein.
          Length = 1406

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
 Frame = +1

Query: 196  TELKPIGHCYRITC------GGSMIDYA---SCGVVATNDEHC---HVTEIDPKKPY 330
            T +KPI + Y I+C      GG  I YA   +C     ND  C   H  EID    Y
Sbjct: 1306 THIKPIYNLYAISCHSGILSGGHYITYAKNPNCKWYCYNDSSCEELHPDEIDTDSAY 1362


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,199,696
Number of Sequences: 237096
Number of extensions: 1172915
Number of successful extensions: 2131
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)