Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G17
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical pr...    29   3.7  
M77697-7|AAA27902.6|  903|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z82078-4|CAB04945.1|  362|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z73910-1|CAA98134.2|  523|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p...    28   6.5  
AL117195-5|CAB55012.1|  732|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U21317-4|AAA62523.1|  719|Caenorhabditis elegans Hypothetical
           protein B0495.2 protein.
          Length = 719

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +3

Query: 132 EGSYKFGFETEDGITREEVGELKEALDEENKPHPVIAVRGSYSYLNTENKPEIVN 296
           EG++   +  +D  T E V   +  +++E +  P+ A+R     L   N P IVN
Sbjct: 364 EGTFGVVYRGKDKRTDEIVALKRLKMEKEKEGFPITALREINMLLKAGNHPNIVN 418


>M77697-7|AAA27902.6|  903|Caenorhabditis elegans Hypothetical
           protein B0303.11 protein.
          Length = 903

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = -1

Query: 335 ITTSVVTGLVSEIIYYLWLVFSIEVRIGATDCNHRMRLVLFIKSFLQFSNFLTSDTIFSF 156
           + TS      +E + +++  FS+E+  GAT   H +RLV  + S +  +  +  +    F
Sbjct: 110 VATSTFLTSAAEAVLHIFSTFSLELLDGAT---HDLRLVSSVLSLITLALCMVRNRNARF 166

Query: 155 ETEFVAALGII 123
              F+ AL  I
Sbjct: 167 VRTFIFALTCI 177


>Z82078-4|CAB04945.1|  362|Caenorhabditis elegans Hypothetical
           protein W09D6.3 protein.
          Length = 362

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/63 (22%), Positives = 30/63 (47%)
 Frame = -1

Query: 320 VTGLVSEIIYYLWLVFSIEVRIGATDCNHRMRLVLFIKSFLQFSNFLTSDTIFSFETEFV 141
           + G+V+  +  ++++F    + G   C   M  +   + F    +FLT  TI+S  + F+
Sbjct: 13  IFGVVNNFLLIIFIIFKSPKQFGNYKC--LMAYISIFEIFYSILDFLTVPTIYSHNSAFL 70

Query: 140 AAL 132
             +
Sbjct: 71  VII 73


>Z73910-1|CAA98134.2|  523|Caenorhabditis elegans Hypothetical
           protein M117.1 protein.
          Length = 523

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -1

Query: 236 HRMRLVLFIKSFLQFSNFLTSDTIFSFETEFV 141
           HR+R V+FI ++LQ  + +    +FSF   ++
Sbjct: 74  HRIRWVIFILTWLQLGSVMNCVDVFSFSMVYM 105


>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical
           protein T11G6.5 protein.
          Length = 1406

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 250 PRTAITG*GLFSSSRA--SFNSPTSSRVIPSSVSKPNL*LPSGLLIN 116
           PR+A+   G FSS +    FN P SS ++PS    P    P G+ +N
Sbjct: 639 PRSALPSAGPFSSPQPVPRFNGPPSSFILPSIYPPP----PPGVSLN 681


>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
           protein T11G6.5 protein.
          Length = 1406

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = -2

Query: 250 PRTAITG*GLFSSSRA--SFNSPTSSRVIPSSVSKPNL*LPSGLLIN 116
           PR+A+   G FSS +    FN P SS ++PS    P    P G+ +N
Sbjct: 639 PRSALPSAGPFSSPQPVPRFNGPPSSFILPSIYPPP----PPGVSLN 681


>AL117195-5|CAB55012.1|  732|Caenorhabditis elegans Hypothetical
           protein Y57A10A.7 protein.
          Length = 732

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 264 LNTENKPEIVNYFADETGYHASGDSIPKP 350
           +N ++ PE  +Y +DE  Y+ S   +PKP
Sbjct: 503 MNNQSIPEDPSYKSDEVEYNGSLPGLPKP 531


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,010,463
Number of Sequences: 27780
Number of extensions: 262218
Number of successful extensions: 693
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)