Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G16
         (373 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              30   0.008
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   2.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   3.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   4.7  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 30.3 bits (65), Expect = 0.008
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
 Frame = +3

Query: 30  ECSRPLAPSLEMKHRG---ECQEVKVADIQPCICTREI----KQVCGSDGVTYGNPCLLN 188
           E SR + P    K+ G   EC+    + I  C+C R+     + VC S+G  Y N C L+
Sbjct: 74  ESSRSIDPCAS-KYCGIGKECELSPNSTIAVCVCMRKCPRRHRPVCASNGKIYANHCELH 132

Query: 189 -CATQSNPSLS 218
             A  S  SL+
Sbjct: 133 RAACHSGSSLT 143



 Score = 25.8 bits (54), Expect = 0.16
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 324 CTRNLEPVCASNGVTY 371
           C R   PVCASNG  Y
Sbjct: 110 CPRRHRPVCASNGKIY 125


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 10/31 (32%), Positives = 12/31 (38%)
 Frame = -2

Query: 261 PQPSLCCRKDPGVRCSSSGSTVWRNSTGTGC 169
           P PS  CR         SGS +W+      C
Sbjct: 47  PIPSYACRGRCSSYLQVSGSKIWQMERSCMC 77


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 97  TLTSWHSPRCFIS 59
           T  SWHSP   IS
Sbjct: 152 TEASWHSPEAHIS 164


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -1

Query: 208 GFDCVAQFNRHGLP*VTPSLPQ--TCLISRVQIHGCISA 98
           G   ++ +N   +P    + P+  TC IS    +GC+ A
Sbjct: 147 GVHSLSDYNDKPIPASCCNSPENNTCSISNSYTNGCVEA 185



 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -2

Query: 261 PQPSLCCRKDPGVRCSSSGS 202
           P P+ CC       CS S S
Sbjct: 158 PIPASCCNSPENNTCSISNS 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,333
Number of Sequences: 438
Number of extensions: 2431
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)