Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_G14
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1014 - 26902971-26903085,26903182-26903270,26904302-269043... 58 4e-09
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 56 8e-09
01_06_0458 + 29531069-29531126,29531247-29531302,29531407-295315... 50 1e-06
06_03_0510 - 21615724-21615909,21615992-21616075,21616164-216162... 48 4e-06
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 31 0.47
09_02_0465 - 9594866-9595672,9596036-9597496 29 1.1
07_03_0251 + 15831712-15832127,15832203-15832344,15832692-158330... 29 1.1
01_06_0876 - 32654209-32654238,32654357-32654672,32654833-326549... 29 1.1
12_01_0518 - 4093206-4094955,4095357-4095810,4095966-4096236,409... 28 3.3
12_01_0512 - 4055074-4055337,4055424-4055727,4055774-4055898,405... 28 3.3
08_02_0358 + 16176373-16176534,16176628-16176739,16176967-161771... 27 5.8
07_03_1472 - 26753070-26753177,26753254-26753531,26753691-267538... 27 5.8
11_04_0320 + 16354122-16354226,16354652-16356859 27 7.7
08_02_0603 + 19208177-19210033,19210581-19210618,19210937-192110... 27 7.7
06_03_0748 - 24126603-24128038,24128582-24128897 27 7.7
01_06_1031 - 33945681-33945822,33946502-33946641,33946748-339469... 27 7.7
>06_03_1014 -
26902971-26903085,26903182-26903270,26904302-26904380,
26904488-26904585,26904848-26904952,26905031-26905117,
26905218-26905412,26905890-26905996,26906559-26906754,
26906865-26906966,26907100-26907171,26907404-26907505,
26907638-26907675,26907769-26907880,26907972-26908028,
26908122-26908177,26908283-26908409,26908856-26908910,
26908919-26909049
Length = 640
Score = 57.6 bits (133), Expect = 4e-09
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Frame = +3
Query: 24 VFAGVGERTREGNDLYHEMIESGVISL-------KDKTSKVALVYGQMNEPPGARARVAL 182
V+ G GER GN++ +++ +++ + + LV N P AR
Sbjct: 292 VYVGCGER---GNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIY 348
Query: 183 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQE 362
TG+T+AEYFRD G +V + D+ R+ +A E+S L +P+ GY LA + + E
Sbjct: 349 TGITIAEYFRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYE 407
Query: 363 RITTTK-------KGSITSVQAI 410
R K GS+T V A+
Sbjct: 408 RAGKVKCLGSPDRTGSVTIVGAV 430
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 56.4 bits (130), Expect = 8e-09
Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Frame = +3
Query: 24 VFAGVGERTREGNDLYHEMIESGVISLKDKTSKV----ALVYGQMNEPPGARARVALTGL 191
V+ G GER E ++ + + + + + V LV N P AR TG+
Sbjct: 278 VYVGCGERGNEMAEVLMDFPQLTMTTEDGREESVMKRTTLVANTSNMPVAAREASIYTGI 337
Query: 192 TVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI- 368
T+AEY+RD G +V + D+ R+ +A E+S L +P+ GY LA + + ER
Sbjct: 338 TIAEYYRDM-GYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAG 396
Query: 369 ------TTTKKGSITSVQAI 410
+ + GS+T V A+
Sbjct: 397 KVRCLGSPKRDGSVTIVGAV 416
>01_06_0458 +
29531069-29531126,29531247-29531302,29531407-29531505,
29531989-29532048,29532285-29532396,29532459-29532694,
29533092-29533220,29533325-29533462,29534043-29534193,
29534394-29534476,29534658-29534705,29534828-29534881,
29534971-29535054,29535152-29535337
Length = 497
Score = 49.6 bits (113), Expect = 1e-06
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = +3
Query: 24 VFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAE 203
VFA +G + E+G + +V L N+P R LT AE
Sbjct: 217 VFAAMGVNMETAQFFKRDFEENGSME------RVTLFLNLANDPTIERIITPRIALTTAE 270
Query: 204 YFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTT 377
Y + G+ VL+ + ++ + A EVSA +P GY + TD+ T+ ER
Sbjct: 271 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 330
Query: 378 KKGSITSV 401
+KGSIT +
Sbjct: 331 RKGSITQI 338
>06_03_0510 -
21615724-21615909,21615992-21616075,21616164-21616217,
21616324-21616371,21616529-21616611,21616963-21617113,
21617648-21617785,21617966-21618094,21618391-21618596,
21618734-21618845,21619145-21619204,21619331-21619429,
21619520-21619575,21620230-21620313,21621407-21621500
Length = 527
Score = 47.6 bits (108), Expect = 4e-06
Identities = 36/128 (28%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Frame = +3
Query: 24 VFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAE 203
VFA +G + E+G + +V L N+P R LT AE
Sbjct: 247 VFAAMGVNMETAQFFKRDFEENGSME------RVTLFLNLANDPTIERIITPRIALTTAE 300
Query: 204 YFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTT 377
Y + G+ VL+ + ++ + A EVSA +P GY + TD+ T+ ER
Sbjct: 301 YLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEG 360
Query: 378 KKGSITSV 401
+ GSIT +
Sbjct: 361 RSGSITQI 368
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 30.7 bits (66), Expect = 0.47
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 183 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTL 335
TGLT A+ D+ + V F+DN R G + + G++ S +G P L
Sbjct: 260 TGLTPAQLAADKSHRQVAFFLDNAKRVYDRGCDGNTNFGKL-SKLGLAPVL 309
>09_02_0465 - 9594866-9595672,9596036-9597496
Length = 755
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +3
Query: 102 LKDKTSKVALVYGQMNEPPGARARVALTGLTVA-------EYFRDQEGQDVLLFIDNIFR 260
LK + K+A+ YG +N PPG RV + L V +Y EG+ +LL N F
Sbjct: 684 LKYHSEKLAVAYGILNIPPGRPIRV-IKNLRVCGDCHNAFKYISAIEGRLILLRDSNRFH 742
Query: 261 FTQAGS 278
+ GS
Sbjct: 743 HFRGGS 748
>07_03_0251 +
15831712-15832127,15832203-15832344,15832692-15833056,
15833134-15833293,15833699-15834036,15834138-15834315,
15834454-15834987,15835176-15836291
Length = 1082
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +3
Query: 3 KAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVAL 182
+ H G S +A + RT L ++ E + + + V+G++NEP G +A + L
Sbjct: 67 RPHSG-SNYAVLTRRTHNWQGLEQDITEKVTVGTEYIVAAHVRVHGELNEPVGIQATLKL 125
Query: 183 TG 188
G
Sbjct: 126 EG 127
>01_06_0876 -
32654209-32654238,32654357-32654672,32654833-32654901,
32655238-32655275,32655418-32655478,32655550-32655617,
32655729-32655889,32656687-32656751,32656883-32656956,
32658158-32658245,32658800-32658879,32659168-32659224,
32659332-32659404,32659524-32659762,32659846-32660025,
32660150-32660440
Length = 629
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 255 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQA 407
F + + LG+I +G QP GT +R TT++ ++ VQA
Sbjct: 238 FHLYKENKDTQEALGKIGKMLGLQPRSFGFAGTKDKRAVTTQQVTVFKVQA 288
>12_01_0518 -
4093206-4094955,4095357-4095810,4095966-4096236,
4096308-4096628
Length = 931
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = -1
Query: 202 SATVRPVSATRAR----APGGSFICP*TRATLEVLSFREMTPDSIISWYKSLPSRVRSPT 35
SA V PV A R A G + P ++ L E T S+ W LPSR +P+
Sbjct: 247 SAPVSPVVAFTPRQAEVAAGWPLLSPDLKSALP-----EWTEMSVARWAMQLPSRCPAPS 301
Query: 34 PAN 26
P N
Sbjct: 302 PLN 304
>12_01_0512 -
4055074-4055337,4055424-4055727,4055774-4055898,
4055995-4056164,4056264-4056524,4056644-4057153,
4057309-4057588,4057669-4057971
Length = 738
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = -1
Query: 202 SATVRPVSATRAR----APGGSFICP*TRATLEVLSFREMTPDSIISWYKSLPSRVRSPT 35
SA V PV A R A G + P ++ L E T S+ W LPSR +P+
Sbjct: 244 SAPVSPVVAFTPRQAEVAAGWPLLSPDLKSALP-----EWTEMSVARWAMQLPSRCPAPS 298
Query: 34 PAN 26
P N
Sbjct: 299 PLN 301
>08_02_0358 +
16176373-16176534,16176628-16176739,16176967-16177151,
16177325-16177330
Length = 154
Score = 27.1 bits (57), Expect = 5.8
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -1
Query: 205 YSATVRPVSATRARAPGGSFICP*TRATLEVLSFREMTPDSIISWYKSLPSRVRSPTPAN 26
Y T V A+ R G +F C T +L M ++ YK+ S++ P PA
Sbjct: 24 YLETSIHVHASVPRRMGLAFTCT---CTSSLLCQGPMQMKMLLDVYKAFISKLVKPPPAG 80
Query: 25 TE*PPW 8
T PW
Sbjct: 81 TWLTPW 86
>07_03_1472 -
26753070-26753177,26753254-26753531,26753691-26753865,
26754974-26755468
Length = 351
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 376 VVVILSCIVPMSVARVGW*PTADGIRPSKADTSEPAC 266
+V++L+C V + + GW ADGIRP + AC
Sbjct: 148 LVMLLNCSVRL--LKFGWKMEADGIRPFTMPLMKLAC 182
>11_04_0320 + 16354122-16354226,16354652-16356859
Length = 770
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 99 SLKDKTSKVALVYGQMNEPPGARARV 176
SLK + ++A+ G + PPGA RV
Sbjct: 695 SLKHHSERLAVALGLLQTPPGATVRV 720
>08_02_0603 +
19208177-19210033,19210581-19210618,19210937-19211059,
19211471-19211852
Length = 799
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -1
Query: 160 PGGSFICP*TRATLEVLSFREMTPDSIISWYKSLPSRVRSPTPA 29
P SF+C + L V S R PD + L R+P P+
Sbjct: 86 PASSFLCD-AASALVVASARLRLPDGALRLLSDLADEARAPLPS 128
>06_03_0748 - 24126603-24128038,24128582-24128897
Length = 583
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 114 TSKVALVYGQMNEPPGARARV 176
+ K+A+ +G MN PPG RV
Sbjct: 516 SEKLAITFGLMNTPPGLTIRV 536
>01_06_1031 -
33945681-33945822,33946502-33946641,33946748-33946995,
33947355-33947576,33948188-33948839
Length = 467
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 202 SATVRPVSATRARAPGGSFICP*TRATLEVLSFREMTPDSII 77
S +V A R+ AP +CP +A ++L RE+ PDSI+
Sbjct: 390 SLSVMHPEANRSVAPVE--MCPILKALYKILIKRELPPDSIL 429
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,918,509
Number of Sequences: 37544
Number of extensions: 250238
Number of successful extensions: 665
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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