Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_G14
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 266 4e-72
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 64 3e-11
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 47 6e-06
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 41 3e-04
Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical pr... 29 1.7
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec... 28 2.3
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l... 28 2.3
AF099916-4|AAC68778.1| 189|Caenorhabditis elegans Hypothetical ... 27 5.3
AF039037-1|AAO21431.1| 312|Caenorhabditis elegans Hypothetical ... 26 9.2
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 266 bits (652), Expect = 4e-72
Identities = 129/136 (94%), Positives = 131/136 (96%)
Frame = +3
Query: 3 KAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVAL 182
KAHGGYSVFAGVGERTREGNDLYHEMIE GVI LK K SKV+LVYGQMNEPPGARARV L
Sbjct: 234 KAHGGYSVFAGVGERTREGNDLYHEMIEGGVIDLKGKNSKVSLVYGQMNEPPGARARVCL 293
Query: 183 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQE 362
TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMG+MQE
Sbjct: 294 TGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQE 353
Query: 363 RITTTKKGSITSVQAI 410
RITTTKKGSITSVQAI
Sbjct: 354 RITTTKKGSITSVQAI 369
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 64.5 bits (150), Expect = 3e-11
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Frame = +3
Query: 24 VFAGVGERTREGNDLYHEMIESGVISLKDKTS---KVALVYGQMNEPPGARARVALTGLT 194
++ G GER E +++ + E + TS + ALV N P AR TG+T
Sbjct: 262 IYVGCGERGNEMSEVLRDFPELTMEVEGVTTSIMKRTALVANTSNMPVAAREASIYTGIT 321
Query: 195 VAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITT 374
+AEYFRD G +V + D+ R+ +A E+S LG +P+ GY LA + + ER
Sbjct: 322 LAEYFRDM-GLNVAMMADSTSRWAEALREISGRLGEMPADSGYPAYLAARLASFYERAGR 380
Query: 375 TK-------KGSITSVQAI 410
K +GS+T V A+
Sbjct: 381 VKCLGSPEREGSVTIVGAV 399
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 46.8 bits (106), Expect = 6e-06
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +3
Query: 123 VALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGR 302
V L N+P R LT AE+F G+ VL+ + ++ + +A E+SA
Sbjct: 249 VCLFLNLANDPTIERIITPRIALTAAEFFAYHCGKHVLVVLTDMSSYAEALREISAAREE 308
Query: 303 IPSAVGYQPTLATDMGTMQERITTTK--KGSITSV 401
+P G+ + TD+ T+ ER K +GSIT +
Sbjct: 309 VPGRRGFPGYMYTDLATIYERAGRVKGREGSITQI 343
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 41.1 bits (92), Expect = 3e-04
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Frame = +3
Query: 24 VFAGVGERTREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAE 203
VFA +G + E+G + V L N+P R LT AE
Sbjct: 210 VFAAMGVNMETARFFKQDFEENGSME------NVCLFLNLANDPTIERIITPRIALTSAE 263
Query: 204 YFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTT 377
+ Q + VL+ + ++ + +A EVSA +P G+ + TD+ T+ ER
Sbjct: 264 FLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEG 323
Query: 378 KKGSITSV 401
+ GSIT +
Sbjct: 324 RDGSITQI 331
>Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical
protein F28H7.6 protein.
Length = 525
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 182 ECNTGSCTRGFIHLSIDKSYLGSLVFQGD 96
+C G C GF+ ++ Y G FQGD
Sbjct: 322 KCYQGECRGGFVSEAVKDRYSGCETFQGD 350
>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin
receptor protein 2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 15 GYSVFAGVGERTREGNDLYHEMIESGVI--SLKDKTSKVAL 131
GY FAG G+ ND H +I S VI S+++ T V L
Sbjct: 780 GYYAFAGFGQLLNNNND--HTLINSQVIGASIQNATQSVTL 818
>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
protein LAT-2 protein.
Length = 1338
Score = 28.3 bits (60), Expect = 2.3
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 15 GYSVFAGVGERTREGNDLYHEMIESGVI--SLKDKTSKVAL 131
GY FAG G+ ND H +I S VI S+++ T V L
Sbjct: 780 GYYAFAGFGQLLNNNND--HTLINSQVIGASIQNATQSVTL 818
>AF099916-4|AAC68778.1| 189|Caenorhabditis elegans Hypothetical
protein F54C4.1 protein.
Length = 189
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 36 VGERTREGNDLYHEMIESGVISLKDKT-SKVAL 131
+GER R +L E I+ I+LKD T S++AL
Sbjct: 84 IGERRRPRTELTLEQIDERAIALKDYTRSRLAL 116
>AF039037-1|AAO21431.1| 312|Caenorhabditis elegans Hypothetical
protein R02C2.1 protein.
Length = 312
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +3
Query: 84 ESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFID 248
E G++ K + LVY + + PG + +T +A +R ++G++++L D
Sbjct: 137 EQGIVHRDIKLENLLLVYSESEDDPGT---LKITDFGLATKYR-KDGEEIMLSED 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,975,762
Number of Sequences: 27780
Number of extensions: 211524
Number of successful extensions: 645
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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