Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G14
         (412 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.58 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.1  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   4.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   4.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.2  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   9.5  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 0.58
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +2

Query: 302  YSISCRLPAHSSH*HGYYARENYHYQEGF---HY-FCTSYL 412
            YSIS     H    H   A   Y  Q+GF   HY  C++YL
Sbjct: 899  YSISSSPDVHQGQIHLTVAVVQYKTQDGFGPIHYGVCSNYL 939


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = -1

Query: 370 VILSCIVPMSVARVGW*PTADGIR 299
           VI+ C++ +S+    W P  + ++
Sbjct: 4   VIVFCLMALSIVDAAWKPLPENLK 27


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 135 RQELPWKSC 109
           R ELPW SC
Sbjct: 93  RSELPWGSC 101


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = -1

Query: 370 VILSCIVPMSVARVGW*PTADGIR 299
           VI+ C++ +S+    W P  + ++
Sbjct: 4   VIVFCLMALSIVDAAWKPLPENLK 27


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 284 ICFAWSYSISCRLP 325
           + FAW  S+ C LP
Sbjct: 157 LSFAWIGSVVCSLP 170


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 78  MIESGVISLKDKTS 119
           M+ESG +SLK++ +
Sbjct: 50  MLESGCVSLKNEVN 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,322
Number of Sequences: 438
Number of extensions: 2246
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)