Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G12
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69646-6|CAD44142.1|  287|Caenorhabditis elegans Hypothetical pr...    34   0.071
Z69646-5|CAA93474.1|  288|Caenorhabditis elegans Hypothetical pr...    34   0.071
U80452-5|AAB37859.1|  180|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U64859-7|AAC69095.1|  344|Caenorhabditis elegans Serpentine rece...    27   8.2  
AL032633-2|CAA21595.2|  428|Caenorhabditis elegans Hypothetical ...    27   8.2  

>Z69646-6|CAD44142.1|  287|Caenorhabditis elegans Hypothetical
           protein F57C7.3b protein.
          Length = 287

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +1

Query: 1   GSYALDEPKRSPAAASYG-KGHNNREFYA 84
           GSYALDEPK++   ASYG    + +EFYA
Sbjct: 259 GSYALDEPKQARPYASYGYTKASTKEFYA 287


>Z69646-5|CAA93474.1|  288|Caenorhabditis elegans Hypothetical
           protein F57C7.3a protein.
          Length = 288

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +1

Query: 1   GSYALDEPKRSPAAASYG-KGHNNREFYA 84
           GSYALDEPK++   ASYG    + +EFYA
Sbjct: 260 GSYALDEPKQARPYASYGYTKASTKEFYA 288


>U80452-5|AAB37859.1|  180|Caenorhabditis elegans Hypothetical
           protein C16C8.5 protein.
          Length = 180

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 462 DNFIFKYFTFTSF*THCLNRILYIHVYNSYMNNYIRIKHSDVL 334
           DN +F+ F F  +  H       + V NSY+  Y+R+K +++L
Sbjct: 83  DNSLFEIFVFDDYKYHA------VEVRNSYLIRYVRVKVANLL 119


>U64859-7|AAC69095.1|  344|Caenorhabditis elegans Serpentine
           receptor, class h protein11 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = -2

Query: 533 SFTILSSFRYYTSFHII*NLVSKMIILFLNISLS 432
           S  I S+++Y+   HII N++S+  + F+ + ++
Sbjct: 40  SSQIFSTYKYFIIVHIIINIISECYVSFMMLPMT 73


>AL032633-2|CAA21595.2|  428|Caenorhabditis elegans Hypothetical
           protein Y106G6A.2a protein.
          Length = 428

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 363 NCSCKNCTHECIKSYSNNVSKT 428
           NC CK CT E +K YS   + T
Sbjct: 92  NCCCKKCTLEKLKIYSRRENIT 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,832,678
Number of Sequences: 27780
Number of extensions: 290444
Number of successful extensions: 588
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)