Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_G11
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83318-4|CAB05900.1|  145|Caenorhabditis elegans Hypothetical pr...    35   0.029
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    29   1.9  
Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical pr...    28   3.3  
Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical pr...    28   4.3  
U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z82262-2|CAB05152.1|  248|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr...    27   10.0 
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele...    27   10.0 
AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical ...    27   10.0 
AF149287-1|AAF99086.1|  696|Caenorhabditis elegans KAP protein.        27   10.0 

>Z83318-4|CAB05900.1|  145|Caenorhabditis elegans Hypothetical
           protein F55B11.4 protein.
          Length = 145

 Score = 35.1 bits (77), Expect = 0.029
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -3

Query: 335 CSMVRLFNPAERCSSLDSRVS--SPCAANCPAKSGCNFNTTNFSSKLRS 195
           C++V + N A  C+S D  VS  SP   +CP  SGC   TTNF   + S
Sbjct: 9   CAVVGVAN-AIYCNSCDDFVSCGSPITQHCPRHSGCYTMTTNFGQTVIS 56


>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 199 LSFEEKLVVLKLHPDLAGQLAAQGELTRESKDE 297
           LSF+ K +++KLHPD    L    E + E++DE
Sbjct: 278 LSFKRKKLLVKLHPDSYQYLKETVEFSFETRDE 310


>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
           protein H43E16.1 protein.
          Length = 1203

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 275 SSPCAANCPAKSGCNFNTTNFSSKLRSIKYL*NASH-RSDAFE 150
           S P    CP ++ CN N  + S+++ S+K+  + S   SDA++
Sbjct: 40  SCPTCNTCPTQTQCNTNLFSISTQVNSLKWNNDYSDPNSDAYK 82


>Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical
           protein Y57G11C.6 protein.
          Length = 482

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -3

Query: 449 RTSRPLIIDCILFSLAQITNGNPNFCLYL*LYSSIIFFCSMVRLFNPAE 303
           + + P I+D +    +Q      +FC Y  LY S+++F    ++  PAE
Sbjct: 396 KVAEPCIVDIVKSIRSQRPRAVDSFCQYCSLYISLLYFIKK-KVTKPAE 443


>Z81109-2|CAB03244.1|  408|Caenorhabditis elegans Hypothetical
           protein R10D12.2 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +1

Query: 187 YLMDLSFEEKLVVLKLHPDLAGQLAAQGELTRESKDEQRSAGLNNLTMEQKNIIDEY 357
           Y +DL+ +E L + K+H +  GQL  Q  +  E    +   G + ++ E K I+ +Y
Sbjct: 192 YYLDLNEKEPLPLSKIHLNTLGQLNQQNHVESEFIC-KNCPGTDLISTEDKMILIQY 247


>Z19157-6|CAA79569.2| 1556|Caenorhabditis elegans Hypothetical protein
            ZC84.1 protein.
          Length = 1556

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -3

Query: 281  RVSSPCAANCPAKSGCNFNTTN 216
            RV S  AANCPA   C F+++N
Sbjct: 1082 RVCSAGAANCPAGYFCQFSSSN 1103


>U40415-5|AAK39251.1|  655|Caenorhabditis elegans Hypothetical
           protein K02G10.5 protein.
          Length = 655

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 335 CSMVRLFNPAERCSSLDSRVS--SPCAANCPAKSGCNFNTTNFSS 207
           C     FNP   CS  DS+++  SPC A C    G  F  +N+++
Sbjct: 449 CHCDSFFNPV--CSE-DSKLTFLSPCHAGCADMPGIKFGASNWTN 490


>Z82262-2|CAB05152.1|  248|Caenorhabditis elegans Hypothetical
           protein C43F9.5 protein.
          Length = 248

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/40 (30%), Positives = 15/40 (37%)
 Frame = -3

Query: 335 CSMVRLFNPAERCSSLDSRVSSPCAANCPAKSGCNFNTTN 216
           C   R  +    C     R +  C+  CP    CN NT N
Sbjct: 174 CGSFRCTSSNYCCECQYGRTAGLCSNGCPTGYSCNSNTGN 213


>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein
            R107.8 protein.
          Length = 1429

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 136  NKKPFSNASDLCEAFHKYLMDLSFE-EKLVVLKLHPDLAGQLAAQGELTRES 288
            N + + N +D    F+   + +  E E    +KLH + AG  A    +TRES
Sbjct: 993  NPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYAITEPITRES 1044


>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans
            homeotic lin-12 protein gene, complete cds. ).
          Length = 1429

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 136  NKKPFSNASDLCEAFHKYLMDLSFE-EKLVVLKLHPDLAGQLAAQGELTRES 288
            N + + N +D    F+   + +  E E    +KLH + AG  A    +TRES
Sbjct: 993  NPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYAITEPITRES 1044


>AL021481-2|CAA16334.1|  595|Caenorhabditis elegans Hypothetical
           protein Y43F4B.5a protein.
          Length = 595

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 21  WHVFTNNHLGSEQLWW 68
           W VFT N +G+   WW
Sbjct: 326 WRVFTGNEMGALITWW 341


>AF149287-1|AAF99086.1|  696|Caenorhabditis elegans KAP protein.
          Length = 696

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 196 PLNIYEMLHTDQTHLKKASCSKLVLLRPSIILQHC 92
           P+N+  + H  + HLK+ S    +    ++ILQ C
Sbjct: 23  PINVESLGHQKRIHLKEMSLDVDIRALSNVILQKC 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,683,112
Number of Sequences: 27780
Number of extensions: 244211
Number of successful extensions: 671
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)