Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_G10
(231 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomy... 28 0.19
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 1.8
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 24 3.1
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 24 3.1
SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr 1|... 23 4.1
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 23 5.4
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 23 5.4
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 23 5.4
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 23 7.2
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 23 7.2
SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 22 9.5
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 22 9.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 22 9.5
>SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 0.19
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 111 CSGRSSFYCLSLCASASKPILIV 179
C G SSFYCLS+ KP L +
Sbjct: 132 CQGYSSFYCLSIFDRYYKPDLTI 154
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 24.6 bits (51), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +2
Query: 5 TSLREQSWSFHAVAASKLWIPRAA 76
TSL+E S FH A++ +++P ++
Sbjct: 56 TSLKEDSSKFHPSASAPIFVPTSS 79
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 23.8 bits (49), Expect = 3.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
Frame = +2
Query: 47 ASKLWIPRAA------GIRTRAFQYTNMFGKIVF 130
A+++W P A G+R F Y N+F +I F
Sbjct: 155 ANRVWYPDDAAELEETGLRPSRFTYANIFSRISF 188
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 23.8 bits (49), Expect = 3.1
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +1
Query: 55 TMDPPGCRNSDEGL 96
++DPPGC++ D+ L
Sbjct: 506 SIDPPGCQDIDDAL 519
>SPAC3G6.03c |||Maf-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 23.4 bits (48), Expect = 4.1
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 97 SVHKHVREDRLFIACRSVRRRQ 162
S+H+ +++ R+ +A S RR+Q
Sbjct: 17 SMHRQLKDKRIILASGSPRRKQ 38
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 50 SKLWIPRAAGIRTRAFQYTNM-FGKIVFLLLVAL 148
+KLWI +R +A Y N+ F + F L V L
Sbjct: 756 AKLWIRNGTTLRDQAHHYRNLSFHEYTFDLDVLL 789
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 135 CLSLCASASKPILIVRNCYYINTM 206
C LC ++S + C+Y NT+
Sbjct: 196 CSDLCLNSSSLANYLHGCFYHNTL 219
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 23.0 bits (47), Expect = 5.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 98 ERPSSEFLQPGGSIV*TPPPRGSSSFVPL 12
+RP+S QP G+ P P G+S P+
Sbjct: 272 KRPASIAPQPTGASTIAPQPTGTSPSPPV 300
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 120 RSSFYCLSLCASASKPILIV 179
+ F CL L A+ P+L+V
Sbjct: 99 KQGFNCLHLAVHAASPLLVV 118
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 149 CVGVKADTDCQELLLYQHYEEPELLT 226
CV V D EL ++ ++ E ELL+
Sbjct: 609 CVNVILDRIWCELCMFSYFREEELLS 634
>SPCC306.11 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 283
Score = 22.2 bits (45), Expect = 9.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 99 STQTCSGRSSFYCLSLCASASKPILIVRN 185
ST T S RSS LS +PIL R+
Sbjct: 158 STSTHSKRSSGISLSYTNIVDQPILFTRD 186
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 22.2 bits (45), Expect = 9.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 11 LREQSWSFHAVAASKLWIPRAAGIRTRAFQYTNMFGKIVFLLLVAL 148
L+ +WS+ A + + G F N GKIV++L + L
Sbjct: 31 LKHFTWSWFACTMATGGVGLIIGSFPFRFYGLNTIGKIVYILQIFL 76
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 101 TERPSSEFLQPGGSIV*TPPPRGSSSFVPL 12
T P+ + GGS + PP + ++ VPL
Sbjct: 993 TVNPAHTYKPHGGSQIVPPPKQPANRVVPL 1022
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 948,833
Number of Sequences: 5004
Number of extensions: 16291
Number of successful extensions: 39
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 2,362,478
effective HSP length: 56
effective length of database: 2,082,254
effective search space used: 41645080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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